Shewanella putrefaciens JNE2 |
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Putative Shewanella putrefaciens JNE2 RM systems
Ref: Li,R. and Zhang,L. unpublished
REBASE ref # 34374
| Sequence length: | GenBank #: | |
| Chromosome: | 4,588,751 bp | CP096169 |
| plasmid pJNE2-NDM: | 152,348 bp | CP096170 |
REBASE acronym: SpuJNE2
Org_num: 57852
All begin MZ182_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7330 | 189 aa hypothetical protein | |||
| 7335 | M | M.Spu10695II (99% identity) | CAACNNNNNNTTGY | M.SpuJNE2ORF7335P |
| 7340 | S | S.Spu10695II (100% identity) | CAACNNNNNNTTGY | S.SpuJNE2ORF7335P |
| 7345 | R | Spu10695IIP (100% identity) | CAACNNNNNNTTGY | SpuJNE2ORF7335P |
| 7350 | cytoplasmic protein | |||
| 9095 | helix-turn-helix domain-containing protein | |||
| 9100 | M | M.SdeNi13ORF12285P (97% identity) | M.SpuJNE2ORF9100P | |
| 9105 | S | S.Eco6968ORFBP (61% identity) | S.SpuJNE2ORF9100P | |
| 9110 | 139 aa hypothetical protein | |||
| 9115 | DUF86 domain-containing protein | |||
| 9120 | R | Spu4MORF10930P (98% identity) | SpuJNE2ORF9100P | |
| 9125 | 59 aa hypothetical protein | |||
| 13145 | ATP-binding domain-containing protein | |||
| 13150 | R | VvuB2ORFEP (98% identity) | SpuJNE2ORF13150P | |
| 13155 | integrase | |||
| 18260 | 293 aa hypothetical protein | |||
| 18265 | R | SbaFHM2ORF19890P (98% identity) | SpuJNE2ORF18275P | |
| 18270 | adenosine monophosphate-protein transferase Fic | |||
| 18275 | M | M.SbaFHM2ORF19890P (94% identity) | M.SpuJNE2ORF18275P | |
| 18280 | S | S.Var7226ORFCP (42% identity) | S.SpuJNE2ORF18275P | |
| 18285 | RNA-directed DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pJNE2-NDM | ||||
| 21050 | 100 aa hypothetical protein | |||
| 21055 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.SpuJNE2ORF21055P |
| 21060 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15240 | 1293 aa hypothetical protein | |||
| 15245 | R | Vfl5335ORF24530P (100% identity) | CAGAAC | SpuJNE2ORF15250P |
| 15250 | M | M.Vfl5335ORF24530P (100% identity) | CAGAAC | M.SpuJNE2ORF15250P |
| 15255 | WYL domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18815 | LysR family transcriptional regulator | |||
| 18820 | R | SpuJNE7ORF19055P (99% identity) | SpuJNE2ORF18820P | |
| 18825 | Fic family protein | |||