Shewanella putrefaciens JNE10-2 |
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Putative Shewanella putrefaciens JNE10-2 RM systems
Ref: Li,R. and Zhang,L. unpublished
REBASE ref # 34374
| Sequence length: | GenBank #: | |
| Chromosome: | 4,663,702 bp | CP096163 |
| plasmid pJNE10-2-NDM: | 166,090 bp | CP096164 |
REBASE acronym: Spu102
Org_num: 57851
All begin MZ018_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3110 | 293 aa hypothetical protein | |||
| 3115 | R | SpuJNE7ORF18780P (100% identity) | Spu102ORF3115P | |
| 3120 | adenosine monophosphate-protein transferase Fic | |||
| 4500 | IS5-like element ISSpu16 family transposase | |||
| 4505 | R | SpuJNE7ORF20185P (100% identity) | Spu102ORF4520P | |
| 4510 | PD-(D/E)XK nuclease family protein | |||
| 4515 | S | S.SpuJNE7ORF20185P (100% identity) | S.Spu102ORF4520P | |
| 4520 | M | M.SpuJNE7ORF20185P (100% identity) | M.Spu102ORF4520P | |
| 4525 | SIR2 family protein | |||
| 11685 | 65 aa hypothetical protein | |||
| 11690 | M | M.SpuJNE7ORF6630P (100% identity) | M.Spu102ORF11690P | |
| 11695 | S | S1.SpuJNE7ORF6630P (100% identity) | S1.Spu102ORF11690P | |
| 11700 | S | S2.SpuJNE7ORF6630P (100% identity) | S2.Spu102ORF11690P | |
| 11705 | Fic family protein | |||
| 11710 | R | SpuJNE7ORF6630P (100% identity) | Spu102ORF11690P | |
| 11715 | OmcA/MtrC family decaheme c-type cytochrome | |||
| 14285 | helix-turn-helix domain-containing protein | |||
| 14290 | M | M.SpuJNE7ORF9230P (100% identity) | M.Spu102ORF14290P | |
| 14295 | S | S.SpuJNE7ORF9230P (100% identity) | S.Spu102ORF14290P | |
| 14300 | 141 aa hypothetical protein | |||
| 14305 | DUF86 domain-containing protein | |||
| 14310 | R | SpuJNE7ORF9230P (100% identity) | Spu102ORF14290P | |
| 14315 | 59 aa hypothetical protein | |||
| 15310 | IS3 family transposase | |||
| 15315 | M | M.SpuJNE7ORF20185P (99% identity) | M.Spu102ORF15315P | |
| 15320 | S | S.SpuJNE7ORF20185P (36% identity) | S1.Spu102ORF15315P | |
| 15325 | S | S.SpuJNE7ORF20185P (60% identity) | S2.Spu102ORF15315P | |
| 15330 | PD-(D/E)XK nuclease family protein | |||
| 15335 | 233 aa hypothetical protein | |||
| 15340 | R | SpuJNE7ORF20185P (66% identity) | Spu102ORF15315AP | |
| 15345 | R | SpuJNE7ORF20185P (30% identity) | Spu102ORF15315BP | |
| 15350 | Tn3 family transposase | |||
| 20570 | AAA family ATPase | |||
| 20575 | R | SpuJNE7ORF15505P (100% identity) | Spu102ORF20590P | |
| 20580 | BstXI family restriction endonuclease | |||
| 20585 | S | S.VchSXTORFAP (100% identity) | S.Spu102ORF20590P | |
| 20590 | M | M.VchSXTORFAP (100% identity) | M.Spu102ORF20590P | |
| 20595 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3785 | DUF2970 domain-containing protein | |||
| 3790 | M | M.SspW3ORF3844P (100% identity) | GATC | M.Spu102DamP |
| 3795 | AAA family ATPase | |||
| plasmid pJNE10-2-NDM | ||||
| 21395 | 100 aa hypothetical protein | |||
| 21400 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Spu102ORF21400P |
| 21405 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3385 | LysR family transcriptional regulator | |||
| 3390 | R | SpuJNE7ORF19055P (100% identity) | Spu102ORF3390P | |
| 3395 | Fic family protein | |||
| 20555 | 93 aa hypothetical protein | |||
| 20560 | R | Vch216MrrP (100% identity) | Spu102MrrP | |
| 20565 | 5-methylcytosine-specific restriction | |||
| 20560 | restriction endonuclease | |||
| 20565 | R | VchSXTMcrCP (100% identity) | Spu102McrCP | |
| 20570 | R | SpuJNE7McrBP (100% identity) | Spu102McrBP | |
| 20575 | type I restriction endonuclease subunit R | |||