Escherichia coli LS45 |
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Putative Escherichia coli LS45 RM systems
Ref: Ma,J. unpublished
REBASE ref # 27651
| Sequence length: | GenBank #: | |
| Chromosome: | 5,120,890 bp | CP095448 |
| plasmid pLS45-2: | 93,690 bp | CP095450 |
REBASE acronym: EcoLS45
Org_num: 57714
All begin MWN28_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1940 | cell division protein DamX | |||
| 1945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLS45DamP |
| 1950 | ribulose-phosphate 3-epimerase | |||
| 2470 | DUF2556 family protein | |||
| 2475 | M | M.Ecost20ORFAP (100% identity) | ATGCAT | M.EcoLS45ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 4480 | superoxide dismutase [Cu-Zn] SodC | |||
| 4485 | R | SenS530DptFP (100% identity) | EcoLS45DptFP | |
| 4490 | DNA phosphorothioation-dependent restriction | |||
| 4485 | DNA phosphorothioation-dependent restriction | |||
| 4490 | R | SenI222DptGP (100% identity) | EcoLS45DptGP | |
| 4495 | DNA phosphorothioation-dependent restriction | |||
| 4490 | DNA phosphorothioation-dependent restriction | |||
| 4495 | R | SenS530DptHP (99% identity) | EcoLS45DptHP | |
| 4500 | DUF262 domain-containing protein | |||
| 4505 | ATP-binding protein | |||
| 4510 | M | M.SenS530DndEP (100% identity) | M.EcoLS45DndEP | |
| 4515 | DNA sulfur modification protein DndD | |||
| 4510 | DNA sulfur modification protein DndE | |||
| 4515 | M | M.SenS530DndDP (100% identity) | M.EcoLS45DndDP | |
| 4520 | DNA phosphorothioation system sulfurtransferase | |||
| 4515 | DNA sulfur modification protein DndD | |||
| 4520 | M | M.SenS530DndCP (100% identity) | M.EcoLS45DndCP | |
| 4525 | DNA sulfur modification protein DndB | |||
| 4520 | DNA phosphorothioation system sulfurtransferase | |||
| 4525 | M | M.SenS530DndBP (100% identity) | M.EcoLS45DndBP | |
| 4530 | DNA-binding protein | |||
| 6180 | TraR/DksA family transcriptional regulator | |||
| 6185 | M | M.EcoXH992ORF11580P (100% identity) | GATC | M.EcoLS45ORF6185P |
| 6190 | replication endonuclease | |||
| 6980 | DUF1382 family protein | |||
| 6985 | M | M.EcoXH992ORF12425P (100% identity) | M.EcoLS45ORF6985P | |
| 6990 | PerC family transcriptional regulator | |||
| 14120 | drug/metabolite exporter YedA | |||
| 14125 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoLS45DcmP |
| 14130 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoLS45DcmP |
| 14135 | phosphohydrolase | |||
| plasmid pLS45-2 | ||||
| 25600 | 103 aa hypothetical protein | |||
| 25605 | M | M.SflN101ORF24625P (100% identity) | M.EcoLS45ORF25605P | |
| 25610 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22305 | transposase | |||
| 22310 | R | EcoM1881ORF3760P (100% identity) | GTCTC | EcoLS45ORF22315P |
| 22315 | M | M.Eco18006ORF4500P (100% identity) | GTCTC | M.EcoLS45ORF22315P |
| 22320 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20775 | GTPase | |||
| 20780 | R | Ssp28760MrrP (100% identity) | EcoLS45MrrP | |
| 20785 | type I restriction-modification system | |||
| 20800 | endoribonuclease SymE | |||
| 20805 | R | SenHNK130McrBP (100% identity) | EcoLS45McrBP | |
| 20810 | R | SenHNK130McrCP (100% identity) | EcoLS45McrCP | |