Escherichia coli 779 |
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Putative Escherichia coli 779 RM systems
Ref: Bao,D. et al. Infect Drug Resist 15, 1499-1503 (2022)
REBASE ref # 34345
| Sequence length: | GenBank #: | |
| Chromosome: | 5,091,593 bp | CP086220 |
| plasmid p779-1-MCR: | 242,460 bp | CP086221 |
| plasmid p779-2: | 114,310 bp | CP086222 |
| plasmid p779-3: | 97,374 bp | CP086223 |
REBASE acronym: Eco779
Org_num: 57712
All begin LMB17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22510 | endoribonuclease SymE | |||
| 22515 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco779ORF22520P |
| 22520 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco779ORF22520P |
| 22525 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco779ORF22520P |
| 22530 | 322 aa hypothetical protein | |||
| plasmid p779-2 | ||||
| 26390 | chromosome segregation protein SMC | |||
| 26395 | M | M.SenS1545ORF24780P (100% identity) | M.Eco779ORF26395P | |
| 26400 | R | SenS1545ORF24780P (100% identity) | Eco779ORF26395P | |
| 26405 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3690 | recombination protein NinB | |||
| 3695 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco779ORF3695P |
| 3700 | NinE family protein | |||
| 8925 | drug/metabolite exporter YedA | |||
| 8930 | V | V.EcoTH9F11DcmP (100% identity) | CCWGG | V.Eco779DcmP |
| 8935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco779DcmP |
| 8940 | phosphohydrolase | |||
| 16555 | DNA-binding transcriptional regulator Fis | |||
| 16560 | M | M.EcoTH9F11ORF2180P (100% identity) | ATGCAT | M.Eco779ORF16560P |
| 16565 | DUF2556 family protein | |||
| 17085 | ribulose-phosphate 3-epimerase | |||
| 17090 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco779DamP |
| 17095 | cell division protein DamX | |||
| 22140 | AAA family ATPase | |||
| 22145 | R | SflN101ORF11875P (100% identity) | Eco779ORF22145P | |
| 22150 | HNH endonuclease | |||
| 22800 | TrmB family transcriptional regulator | |||
| 22805 | M | M.SflFF34ORF18205P (100% identity) | M.Eco779ORF22805P | |
| 22810 | phage holin, lambda family | |||
| plasmid p779-1-MCR | ||||
| 25380 | 55 aa hypothetical protein | |||
| 25385 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco779ORF25385P |
| 25390 | thermonuclease family protein | |||
| 26015 | 48 aa hypothetical protein | |||
| 26020 | M | M.YpsF1ORFBP (100% identity) | M.Eco779ORF26020P | |
| 26025 | 202 aa hypothetical protein | |||
| 26135 | DNA-binding protein | |||
| 26140 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco779ORF26140P |
| 26145 | 284 aa hypothetical protein | |||
| plasmid p779-3 | ||||
| 27360 | recombination-associated protein RdgC | |||
| 27365 | M | M.Sen94620ORF28085P (100% identity) | M.Eco779ORF27365P | |
| 27370 | 86 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22130 | 128 aa hypothetical protein | |||
| 22135 | R | SflN101McrCP (100% identity) | Eco779McrCP | |
| 22140 | R | SflN101McrBP (100% identity) | Eco779McrBP | |
| 22145 | HNH endonuclease | |||
| 22495 | IS1-like element IS1B family transposase | |||
| 22500 | R | EcoOS437GmrSDP (100% identity) | Eco779GmrSDP | |
| 22505 | R | Ecos673GmrDP (100% identity) | Eco779GmrDP | |
| 22510 | endoribonuclease SymE | |||