Escherichia coli EC9682 |
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Putative Escherichia coli EC9682 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 34226
| Sequence length: | GenBank #: | |
| Chromosome: | 5,169,503 bp | CP095271 |
| plasmid pEC9682-2: | 96,608 bp | CP095273 |
REBASE acronym: Eco9682
Org_num: 57214
All begin MU524_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21340 | adenine/cytosine-specific restriction | |||
| 21345 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco9682ORF21350P |
| 21350 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco9682ORF21350P |
| 21355 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco9682ORF21350P |
| 21360 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9682DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco9682ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 5680 | PerC family transcriptional regulator | |||
| 5685 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco9682ORF5685P |
| 5690 | LexA family transcriptional regulator | |||
| 13930 | 39 aa hypothetical protein | |||
| 13950 | M | M.SboBSORF1444P (100% identity) | A | M.Eco9682ORF13950P |
| 13955 | TrmB family transcriptional regulator | |||
| 16170 | LexA family transcriptional regulator | |||
| 16175 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9682ORF16175P |
| 16180 | PerC family transcriptional regulator | |||
| 21590 | HNH endonuclease | |||
| 21595 | R | Ecoi127aORF4076P (100% identity) | Eco9682ORF21595P | |
| 21600 | peptidase | |||
| 21890 | conjugal transfer protein TraG N-terminal | |||
| 21895 | M | M.EcosS3ORF15775P (100% identity) | M.Eco9682ORF21895P | |
| 21900 | R | EcosS3ORF15775P (100% identity) | Eco9682ORF21895P | |
| 21905 | response regulator receiver domain | |||
| plasmid pEC9682-2 | ||||
| 26245 | 73 aa hypothetical protein | |||
| 26250 | M | M.Sso866ORF27155P (100% identity) | M.Eco9682ORF26250P | |
| 26255 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5875 | recombinase family protein | |||
| 5880 | R | EspFAAGmrSDP (100% identity) | Eco9682GmrSD2P | |
| 5885 | DinI-like family protein | |||
| 21335 | GTPase | |||
| 21340 | R | EcosS1MrrP (100% identity) | Eco9682MrrP | |
| 21345 | type I restriction-modification system | |||
| 21360 | endoribonuclease SymE | |||
| 21365 | R | EcoUTGmrSD2P (52% identity) | Eco9682GmrSDBP | |
| 21370 | R | EcoSW4848GmrSDAP (100% identity) | Eco9682GmrSDAP | |
| 21375 | Rpn family recombination-promoting | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14820 | NinE family protein | |||
| 14825 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco9682ORF14825P |
| 14830 | recombination protein NinB | |||