Salmonella enterica subsp. enterica serovar Kentucky N12-1542 |
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Putative Salmonella enterica subsp. enterica serovar Kentucky N12-1542 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,813,657 bp | CP092006 |
| plasmid pN12-1542-a: | 340,763 bp | CP092007 |
REBASE acronym: Sen1542
Org_num: 57581
All begin MA816_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19695 | 322 aa hypothetical protein | |||
| 19700 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | Sen1542ORF19705P |
| 19705 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.Sen1542ORF19705P |
| 19710 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.Sen1542ORF19705P |
| 19715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen1542DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1542ORF2270P |
| 2275 | tyrosine-type recombinase/integrase | |||
| 3270 | DUF2732 domain-containing protein | |||
| 3275 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.Sen1542ORF3275P |
| 3280 | replication endonuclease | |||
| 7170 | NinE family protein | |||
| 7175 | M | M.SspA292ORF7010P (100% identity) | M.Sen1542ORF7175P | |
| 7180 | protein ninF | |||
| 9485 | phosphohydrolase | |||
| 9490 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen1542DcmP |
| 9495 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen1542DcmP |
| 9500 | drug/metabolite exporter YedA | |||
| 19835 | YebC/PmpR family DNA-binding transcriptional | |||
| 19840 | R | SspA292ORF20185P (100% identity) | Sen1542ORF19840P | |
| 19845 | malate transporter | |||
| plasmid pN12-1542-a | ||||
| 23925 | IS1 family transposase | |||
| 23930 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Sen1542ORF23930P |
| 23935 | R | YpsR1ORFAP (100% identity) | CCWGG | Sen1542ORF23930P |
| 23940 | EAL domain-containing protein | |||
| 24210 | 55 aa hypothetical protein | |||
| 24215 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen1542ORF24215P |
| 24220 | transposase | |||
| 24915 | 106 aa hypothetical protein | |||
| 24920 | M | M.Ssp15303ORFDP (100% identity) | M.Sen1542ORF24920P | |
| 24925 | 202 aa hypothetical protein | |||
| 25045 | DNA-binding protein | |||
| 25050 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen1542ORF25050P |
| 25055 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17325 | small effector SsaA | |||
| 17330 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen1542ORF17335P |
| 17335 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.Sen1542ORF17335P |
| 17340 | MFS transporter | |||