Pseudoalteromonas species APM04 |
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Putative Pseudoalteromonas species APM04 RM systems
Ref: Guo,Y. et al. unpublished
REBASE ref # 34281
| Sequence length: | GenBank #: | |
| chromosome APM04_1: | 3,457,294 bp | CP094441 |
| chromosome APM04_2: | 693,804 bp | CP094442 |
REBASE acronym: PspAPM04
Org_num: 57534
All begin MTP24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome APM04_1 | ||||
| 400 | 227 aa hypothetical protein | |||
| 405 | M | M1.Psp161bORF1464P (94% identity) | M1.PspAPM04ORF405P | |
| 410 | 436 aa hypothetical protein | |||
| 415 | M | M2.PspG3ORF12550P (97% identity) | M2.PspAPM04ORF405P | |
| 420 | S | S.PspG3ORF12550P (36% identity) | S.PspAPM04ORF405P | |
| 425 | R | Psp161bORF1464P (96% identity) | PspAPM04ORF405P | |
| 430 | 439 aa hypothetical protein | |||
| 9890 | anti-phage defense ZorAB system protein ZorA | |||
| 9895 | M | M.PspPS1M3ORF11700P (99% identity) | M.PspAPM04ORF9895P | |
| 9900 | R | PspPS1M3ORF11700P (91% identity) | PspAPM04ORF9895P | |
| 9905 | CRISPR-associated ring nuclease Csm6 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome APM04_1 | ||||
| 1865 | SPOR domain-containing protein | |||
| 1870 | M | M.PspPS1M3DamP (100% identity) | GATC | M.PspAPM04DamP |
| 1875 | DUF2970 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome APM04_1 | ||||
| 11095 | 462 aa hypothetical protein | |||
| 11100 | R | Vna16374IIP (67% identity) | PspAPM04ORF11105P | |
| 11105 | M | M.Pda2008ORF650P (64% identity) | M.PspAPM04ORF11105P | |
| 11110 | 165 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome APM04_1 | ||||
| 3065 | IS3 family transposase | |||
| 3070 | R | PspMBMcrBP (26% identity) | PspAPM04McrBP | |
| 3075 | R | PspMBMcrCP (42% identity) | PspAPM04McrCAP | |
| 3080 | IS3 family transposase | |||
| 3085 | R | PspMBMcrCP (45% identity) | PspAPM04McrCBP | |
| 3090 | amino acid ABC transporter substrate-binding | |||
| chromosome APM04_2 | ||||
| 17005 | 696 aa hypothetical protein | |||
| 17010 | R | Pte16098ORF12585P (93% identity) | PspAPM04ORF17010P | |
| 17015 | 160 aa hypothetical protein | |||