Escherichia coli Ec-042-T0 |
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Putative Escherichia coli Ec-042-T0 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 34227
Complete sequence: 4,667,306 bp
GenBank #: CP086544
REBASE acronym: Eco042T0
Org_num: 57215
All begin LNN55_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1935 | cell division protein DamX | |||
| 1940 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco042T0DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2560 | DUF2556 family protein | |||
| 2565 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco042T0ORF2565P |
| 2570 | DNA-binding transcriptional regulator Fis | |||
| 5760 | tyrosine-type recombinase/integrase | |||
| 5765 | M | M.Ecoi64ORF2425P (100% identity) | M.Eco042T0ORF5765P | |
| 5770 | AAA family ATPase | |||
| 5845 | PerC family transcriptional regulator | |||
| 5850 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco042T0ORF5850P |
| 5855 | LexA family transcriptional regulator | |||
| 5890 | TrmB family transcriptional regulator | |||
| 5895 | M | M.Sso63633ORF22290P (100% identity) | M.Eco042T0ORF5895P | |
| 5900 | phage lysis protein EssD | |||
| 9215 | phosphohydrolase | |||
| 9220 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco042T0DcmP |
| 9225 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco042T0DcmP |
| 9230 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9070 | shufflon system plasmid conjugative transfer | |||
| 9075 | R | Sensp14178ORF9290P (100% identity) | CAAACC | Eco042T0ORF9080P |
| 9080 | M | M.Sensp14178ORF9290P (100% identity) | CAAACC | M.Eco042T0ORF9080P |
| 9085 | integrase arm-type DNA-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13145 | NADP-dependent isocitrate dehydrogenase | |||
| 13150 | R | EcosEC27McrCP (100% identity) | Eco042T0McrCP | |
| 13155 | R | EcoteDMcrBP (100% identity) | Eco042T0McrBP | |
| 13160 | recombinase family protein | |||