Weissella cibaria JW15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Weissella cibaria JW15 RM systems
Ref: Ahn,S.-B. et al. J Biomed Res 14 (4), 206-211 (2013)
REBASE ref # 34209
| Sequence length: | GenBank #: | |
| Chromosome: | 2,472,214 bp | CP058237 |
| plasmid pCBA3612-03: | 14,411 bp | CP058240 |
REBASE acronym: WciJW15
Org_num: 57169
All begin HUW87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCBA3612-03 | ||||
| 12170 | HTH domain-containing protein | |||
| 12175 | R | Wco830ORF10P (97% identity) | WciJW15ORF12180P | |
| 12180 | M | M.Lsa22ORF10530P (97% identity) | M.WciJW15ORF12180P | |
| 12185 | S | S.Lsa20ORF3220P (42% identity) | S.WciJW15ORF12180P | |
| 12190 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3270 | 174 aa hypothetical protein | |||
| 3275 | M | M1.WciM2ORF523P (78% identity) | M1.WciJW15ORF3275P | |
| 3280 | M | M2.WciM2ORF523P (89% identity) | M2.WciJW15ORF3275P | |
| 3285 | R | WciM2ORF523P (81% identity) | WciJW15ORF3275P | |
| 3290 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10045 | 160 aa hypothetical protein | |||
| 10050 | R | Wci3636ORF9840P (100% identity) | WciJW15ORF10050P | |
| 10055 | transposase | |||