Salmonella enterica subsp. enterica serovar Indiana LY67 |
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Putative Salmonella enterica subsp. enterica serovar Indiana LY67 RM systems
Ref: Sun,R.-Y. and Fang,L.-X. unpublished
REBASE ref # 34296
Complete sequence: 4,984,512 bp
GenBank #: CP077424
REBASE acronym: SenLY67
Org_num: 57578
All begin KSI13_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 600 | osmoprotectant transport activator ProQ | |||
| 605 | M | M.SflFF24DndBP (100% identity) | M.SenLY67DndBP | |
| 610 | DNA phosphorothioation system sulfurtransferase | |||
| 605 | DNA sulfur modification protein DndB | |||
| 610 | M | M.SflFF24DndCP (100% identity) | M.SenLY67DndCP | |
| 615 | DNA sulfur modification protein DndD | |||
| 610 | DNA phosphorothioation system sulfurtransferase | |||
| 615 | M | M.SflFF24DndDP (100% identity) | M.SenLY67DndDP | |
| 620 | DNA sulfur modification protein DndE | |||
| 615 | DNA sulfur modification protein DndD | |||
| 620 | M | M.SflFF24DndEP (100% identity) | M.SenLY67DndEP | |
| 625 | DNA phosphorothioation-associated DGQHR protein | |||
| 630 | 172 aa hypothetical protein | |||
| 635 | R | EcoY18JDptHP (99% identity) | SenLY67DptHP | |
| 640 | DNA phosphorothioation-dependent restriction | |||
| 635 | DNA phosphorothioation-dependent restriction | |||
| 640 | R | EcoY18JDptGP (100% identity) | SenLY67DptGP | |
| 645 | DNA phosphorothioation-dependent restriction | |||
| 640 | DNA phosphorothioation-dependent restriction | |||
| 645 | R | Sen8497DptFP (100% identity) | SenLY67DptFP | |
| 650 | outer membrane beta-barrel protein | |||
| 1940 | cell division protein DamX | |||
| 1945 | M | M.StyTDamP (100% identity) | GATC | M.SenLY67DamP |
| 1950 | ribulose-phosphate 3-epimerase | |||
| 2435 | DUF2556 family protein | |||
| 2440 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenLY67ORF2440P |
| 2445 | DNA-binding transcriptional regulator Fis | |||
| 3350 | DUF3850 domain-containing protein | |||
| 3355 | M | M.SspZ54ORF6040P (100% identity) | GATC | M.SenLY67ORF3355P |
| 3360 | replication endonuclease | |||
| 9580 | phosphohydrolase | |||
| 9585 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenLY67DcmP |
| 9590 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.SenLY67DcmP |
| 9595 | drug/metabolite exporter YedA | |||
| 20610 | YebC/PmpR family DNA-binding transcriptional | |||
| 20615 | R | Sensp14178ORF19855P (100% identity) | SenLY67ORF20615P | |
| 20620 | DUF2220 domain-containing protein | |||
| 20655 | TnsA endonuclease N-terminal domain-containing | |||
| ??? | R | SenV2ORF20065P (100% identity) | SenLY67ORF20660P | |
| 20665 | malate transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17450 | 33 aa hypothetical protein | |||
| 17455 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenLY67ORF17465P |
| 17460 | IS1 family transposase | |||
| 17465 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.SenLY67ORF17465P |
| 17470 | MFS transporter | |||
| 20250 | 1293 aa hypothetical protein | |||
| 20255 | R | Vfl5335ORF24530P (100% identity) | CAGAAC | SenLY67ORF20260P |
| 20260 | M | M.Vfl5335ORF24530P (100% identity) | CAGAAC | M.SenLY67ORF20260P |
| 20265 | WYL domain-containing protein | |||
| 20690 | S8 family peptidase | |||
| 20695 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenLY67ORF20695P |
| 20700 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenLY67ORF20695P |
| 20705 | integrase arm-type DNA-binding domain-containing | |||