Pseudomonas aeruginosa E113 |
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Putative Pseudomonas aeruginosa E113 RM systems
Ref: Asfahl,K.L. et al. mSystems (2022) In press
REBASE ref # 34138
Complete sequence: 6,864,839 bp
GenBank #: CP093354
REBASE acronym: PaeE113
Org_num: 56985
All begin MN130_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 25 | R | PaestS1ORF12350P (100% identity) | PaeE113ORF35P | |
| 30 | S | S.PaestS1ORF12350P (100% identity) | S.PaeE113ORF35P | |
| 35 | M | M2.PaestS1ORF12350P (100% identity) | M.PaeE113ORF35P | |
| 40 | N-6 DNA methylase | |||
| 12655 | 220 aa hypothetical protein | |||
| 12660 | M | M.PaestS1ORF31855P (100% identity) | M.PaeE113ORF12660P | |
| 12665 | S | S.PaestS1ORF31855P (100% identity) | S.PaeE113ORF12660P | |
| 12670 | AAA family ATPase | |||
| 12695 | DEAD/DEAH box helicase | |||
| 12700 | R | PaestS1ORF31815P (100% identity) | PaeE113ORF12700P | |
| 12705 | IS3 family transposase | |||
| 23750 | AAA family ATPase | |||
| 23755 | S | S.PaePa150ORF22155P (100% identity) | CYYANNNNNNCTGC | S.PaeE113ORF23760P |
| 23760 | M | M.Pfl10783I (100% identity) | CYYANNNNNNCTGC | M.PaeE113ORF23760P |
| 23765 | DNA recombination protein RmuC | |||
| 23770 | R | PaePa150ORF22155P (99% identity) | CYYANNNNNNCTGC | PaeE113ORF23760P |
| 23775 | sigma-54 dependent transcriptional regulator | |||
| 30315 | endonuclease NucS | |||
| 30320 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeE113ORF30325P |
| 30325 | M | M.Pae10782I (100% identity) | CACNNNNNNNRTGT | M.PaeE113ORF30325P |
| 30330 | HNH endonuclease | |||
| 30335 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeE113ORF30325P |
| 30340 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7375 | DUF4406 domain-containing protein | |||
| 7380 | M | M.PaeP9WORF1080P (99% identity) | M.PaeE113ORF7380P | |
| 7385 | 100 aa hypothetical protein | |||
| 12590 | DEAD/DEAH box helicase | |||
| 12595 | RM | PaePA05ORF14460P (100% identity) | PaeE113ORF12595P | |
| 12600 | chromosome partitioning protein ParA | |||
| 22720 | DsbA family protein | |||
| 22725 | M | M.PaestS1ORF21380P (100% identity) | M.PaeE113ORF22725P | |
| 22730 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12665 | restriction endonuclease subunit S | |||
| 12670 | R | PaeM28A1McrBP (100% identity) | PaeE113McrBP | |
| 12675 | R | PaeM28A1McrCP (100% identity) | PaeE113McrCP | |
| 12680 | anti-phage defense ZorAB system protein ZorA | |||