Ralstonia pseudosolanacearum SL1931 |
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Putative Ralstonia pseudosolanacearum SL1931 RM systems
Ref: Riu,M. et al. unpublished
REBASE ref # 34107
| Sequence length: | GenBank #: | |
| Chromosome: | 3,744,397 bp | CP093535 |
| plasmid pRS1931m: | 2,075,606 bp | CP093536 |
| plasmid pRS1931s2: | 34,545 bp | CP093538 |
REBASE acronym: Rps1931
Org_num: 56899
All begin MNY32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 225 | Rrf2 family transcriptional regulator | |||
| 230 | M | M.RsoX05ORF971P (100% identity) | M.Rps1931ORF230P | |
| ??? | R | RsoWR1ORFKP (100% identity) | Rps1931ORF230P | |
| 245 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 20 | RM | RsoRSNORF20P (100% identity) | Rps1931ORF20P | |
| 25 | DEAD/DEAH box helicase | |||
| 1105 | 71 aa hypothetical protein | |||
| 1110 | M | M1.RsoRSNORF1245P (100% identity) | M1.Rps1931ORF1110P | |
| 1115 | M | M2.RsoYC40ORF234P (100% identity) | M2.Rps1931ORF1110P | |
| 1120 | 121 aa hypothetical protein | |||
| 1220 | type III secretion system YopJ family effector | |||
| 1225 | M | M.RsoSY1ORF10970P (100% identity) | M.Rps1931ORF1225P | |
| 1230 | tape measure protein | |||
| 7525 | tryptophan synthase subunit beta | |||
| 7530 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rps1931ORF7530P |
| 7535 | tryptophan synthase subunit alpha | |||
| 8645 | site-specific integrase | |||
| 8650 | M | M.RsoT78ORF8715P (100% identity) | M.Rps1931ORF8650P | |
| 8655 | 80 aa hypothetical protein | |||
| 12885 | phospholipase D family protein | |||
| 12890 | M | M.Rsp650ORF13560P (100% identity) | M.Rps1931ORF12890P | |
| 12895 | H-NS histone family protein | |||
| 13010 | DUF86 domain-containing protein | |||
| 13015 | M | M2.Rsp647ORF4655P (100% identity) | M1.Rps1931ORF13015P | |
| 13020 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rps1931ORF13015P | |
| 13025 | DUF6362 family protein | |||
| plasmid pRS1931m | ||||
| 22860 | IS3 family transposase | |||
| ??? | M | M.RsoRS24ORF26795P (94% identity) | M.Rps1931ORF22865P | |
| 22870 | mannose-binding lectin protein | |||
| 23125 | 121 aa hypothetical protein | |||
| 23130 | M | M2.RsoT78ORF21055P (100% identity) | M1.Rps1931ORF23130P | |
| 23135 | M | M1.RsoT78ORF21055P (100% identity) | M2.Rps1931ORF23130P | |
| 23140 | group II intron reverse transcriptase/maturase | |||
| plasmid pRS1931s2 | ||||
| 26405 | DUF192 domain-containing protein | |||
| 26195 | R | BpsEY8ORF5158P (78% identity) | Rps1931ORF26200P | |
| 26200 | M | M.BphSTMORF3423P (90% identity) | M.Rps1931ORF26200P | |
| 26205 | 181 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 120 | IS3 family transposase | |||
| 125 | R | RsoWR1MrrP (92% identity) | Rps1931MrrP | |
| 130 | PLP-dependent transferase | |||