Escherichia coli TUM13867 |
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Putative Escherichia coli TUM13867 RM systems
Ref: Tsutsumi,Y. et al. unpublished
REBASE ref # 34065
| Sequence length: | GenBank #: | |
| Chromosome: | 4,907,358 bp | AP025657 |
| plasmid pMTY13867_IncFI: | 171,085 bp | AP025658 |
REBASE acronym: Eco13867
Org_num: 56810
All begin TUM13867_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38230 | restriction endonuclease | |||
| 38240 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco13867ORF38250P |
| 38250 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco13867ORF38250P |
| 38260 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco13867ORF38250P |
| 38270 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3680 | cell division protein DamX | |||
| 3690 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco13867DamP |
| 3700 | ribulose-phosphate 3-epimerase | |||
| 4650 | acrEF/envCD operon transcriptional regulator | |||
| 4660 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco13867ORF4660P |
| 4670 | DNA-binding protein Fis | |||
| 18140 | phosphohydrolase | |||
| 18150 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco13867DcmP |
| 18160 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco13867DcmP |
| 18170 | multidrug transporter | |||
| 28200 | protein ninB | |||
| 28210 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco13867ORF28210P |
| 28220 | protein ninX | |||
| plasmid pMTY13867_IncFI | ||||
| 46110 | 73 aa hypothetical protein | |||
| 46120 | M | M.SflN92ORF24820P (100% identity) | M.Eco13867ORF46120P | |
| 46130 | 145 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38220 | GTPase | |||
| 38230 | R | EcosS1MrrP (100% identity) | Eco13867MrrP | |
| 38240 | type I restriction-modification system | |||
| 38270 | endoribonuclease SymE | |||
| ??? | R | EcoST69GmrSDP (100% identity) | Eco13867GmrSDP | |
| 38290 | 306 aa hypothetical protein | |||