Escherichia coli EC21 |
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Putative Escherichia coli EC21 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
Complete sequence: 4,716,858 bp
GenBank #: CP060899
REBASE acronym: EcosEC21
Org_num: 56792
All begin H9206_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13540 | GTPase family protein | |||
| 13545 | M | M.EcoXDLORF9925P (100% identity) | M.EcosEC21ORF13545P | |
| 13550 | IS1 family transposase | |||
| 19190 | restriction endonuclease | |||
| 19195 | M | M.EmaC12ORF11130P (100% identity) | CGAYNNNNNNNTTC | M.EcosEC21ORF19195P |
| 19200 | S | S.EcoXH989ORF20990P (100% identity) | CGAYNNNNNNNTTC | S.EcosEC21ORF19195P |
| 19205 | R | EcoXH989ORF20990P (100% identity) | CGAYNNNNNNNTTC | EcosEC21ORF19195P |
| 19210 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosEC21DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 7955 | replication endonuclease | |||
| 7960 | M | M.Sbo812ORFEP (100% identity) | M.EcosEC21ORF7960P | |
| 7965 | 330 aa hypothetical protein | |||
| 7970 | R | Ecoppa9ORF24330P (100% identity) | EcosEC21ORF7960P | |
| 7975 | phage portal protein | |||
| 8845 | phosphohydrolase | |||
| 8850 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcosEC21DcmP |
| 8855 | V | V.EcosEC71DcmP (100% identity) | V.EcosEC21DcmP | |
| 8860 | drug/metabolite exporter YedA | |||
| 11855 | DUF1367 family protein | |||
| 11860 | R | EcoXH989ORF13350P (100% identity) | GTCGAC | EcosEC21ORF11865P |
| 11865 | M | M.EcoEC18ORF13985P (100% identity) | M.EcosEC21ORF11865P | |
| 11870 | DUF977 family protein | |||
| 19510 | McrC family protein | |||
| 19515 | R | EcoXH989ORF21320P (100% identity) | GGTCTC | EcosEC21ORF19520P |
| 19520 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcosEC21ORF19520P |
| 19525 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcosEC21ORF19520P |
| 19530 | IS21-like element ISEc12 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19185 | BrnT family toxin | |||
| 19190 | R | EcoXH989MrrP (100% identity) | EcosEC21MrrP | |
| 19195 | type I restriction-modification system subunit | |||
| 19500 | IS6-like element IS26 family transposase | |||
| 19505 | R | EcosS3McrBP (100% identity) | EcosEC21McrBP | |
| 19510 | R | EcosS9McrCP (100% identity) | EcosEC21McrCP | |
| 19515 | Alw26I/Eco31I/Esp3I family type II restriction | |||