Limnospira fusiformis KN01 |
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Putative Limnospira fusiformis KN01 RM systems
Ref: Maghembe,R. et al. unpublished
REBASE ref # 34047
Complete sequence: 5,640,992 bp
GenBank #: CP091467
REBASE acronym: LfuKN01
Org_num: 56680
All begin H4N54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | nucleotidyltransferase family protein | |||
| 3410 | R | AmaCSORF1092P (99% identity) | LfuKN01ORF3410P | |
| 3415 | HigA family addiction module antitoxin | |||
| 3460 | IS630 family transposase | |||
| 3465 | S | S1.Asp92ORFI1P (99% identity) | S.LfuKN01ORF3470P | |
| 3470 | M | M.Asp92ORFI1P (99% identity) | M.LfuKN01ORF3470P | |
| 3475 | type II toxin-antitoxin system PemK/MazF family | |||
| 11495 | 83 aa hypothetical protein | |||
| 11500 | R | AmaCSORF4672P (99% identity) | LfuKN01ORF11565P | |
| 11505 | DUF2442 domain-containing protein | |||
| 11510 | DUF4926 domain-containing protein | |||
| 11515 | 110 aa hypothetical protein | |||
| 11520 | S | S.Lfu8579ORF13645P (66% identity) | S.LfuKN01ORF11565P | |
| 11525 | PIN domain-containing protein | |||
| 11530 | 83 aa hypothetical protein | |||
| 11535 | DUF5615 family PIN-like protein | |||
| 11540 | DUF433 domain-containing protein | |||
| 11545 | PIN domain-containing protein | |||
| 11550 | transposase | |||
| 11555 | 105 aa hypothetical protein | |||
| 11560 | 83 aa hypothetical protein | |||
| 11565 | M | M.Asp92ORFKP (99% identity) | M.LfuKN01ORF11565P | |
| 11570 | DUF928 domain-containing protein | |||
| 18005 | 51 aa hypothetical protein | |||
| 18010 | R | LinBM01ORF5200P (99% identity) | LfuKN01ORF18035P | |
| 18015 | 51 aa hypothetical protein | |||
| 18020 | 91 aa hypothetical protein | |||
| 18025 | PIN domain-containing protein | |||
| 18030 | peptide chain release factor 1 | |||
| 18035 | M | M.AmaCSORF3575P (99% identity) | M.LfuKN01ORF18035P | |
| 18040 | 101 aa hypothetical protein | |||
| 18045 | 80 aa hypothetical protein | |||
| 18050 | DUF2281 domain-containing protein | |||
| 18055 | PIN domain-containing protein | |||
| 18060 | 46 aa hypothetical protein | |||
| 18065 | S | S.Asp92ORFZP (61% identity) | S.LfuKN01ORF18035P | |
| 18070 | 71 aa hypothetical protein | |||
| 25995 | anthranilate phosphoribosyltransferase | |||
| ??? | R | Asp8005ORF60699P (100% identity) | LfuKN01ORF26025P | |
| 26010 | TIGR02646 family protein | |||
| 26015 | AAA family ATPase | |||
| 26020 | S | S.SplZORFAP (58% identity) | S.LfuKN01ORF26025P | |
| 26025 | M | M.AplC1ORF203850P (99% identity) | M.LfuKN01ORF26025P | |
| 26030 | trypsin-like peptidase domain-containing | |||
| 26145 | chromosomal replication initiator protein DnaA | |||
| ??? | R | AplC1ORF204170P (31% identity) | LfuKN01ORF26170P | |
| 26155 | S | S.Asp8005ORF60671P (100% identity) | S.LfuKN01ORF26170P | |
| 26160 | type II toxin-antitoxin system HicA family | |||
| 26165 | type II toxin-antitoxin system HicB family | |||
| 26170 | M | M.AplC1ORF204170P (99% identity) | M.LfuKN01ORF26170P | |
| 26175 | DUF433 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 945 | carbamoyl-phosphate synthase large subunit | |||
| 950 | M | M.Asp92ORFCP (100% identity) | RCATGY | M.LfuKN01ORF950P |
| 955 | R | Lfu8579ORF1235P (100% identity) | RCATGY | LfuKN01ORF950P |
| 960 | helix-turn-helix transcriptional regulator | |||
| 1805 | 228 aa hypothetical protein | |||
| 1810 | RM | LinBM01ORF23735P (100% identity) | LfuKN01ORF1810P | |
| 1815 | MerR family transcriptional regulator | |||
| 1930 | SAM-dependent chlorinase/fluorinase | |||
| 1935 | R | Asp9108ORF20760P (97% identity) | CTGCAG | LfuKN01ORF1940P |
| 1940 | M | M.Lfu8579ORF2325P (97% identity) | CTGCAG | M.LfuKN01ORF1940P |
| 1945 | UDP-N-acetylglucosamine 2-epimerase | |||
| 3325 | 219 aa hypothetical protein | |||
| 3330 | R | Lfu8579ORF4815P (100% identity) | CAGCTG | LfuKN01ORF3340P |
| 3335 | helix-turn-helix transcriptional regulator | |||
| 3340 | M | M.Lfu8579ORF4815P (100% identity) | CAGCTG | M.LfuKN01ORF3340P |
| 3345 | CIA30 family protein | |||
| 3660 | bifunctional UDP-N-acetylglucosamine | |||
| 3665 | R | AplC1ORF260660P (100% identity) | CATATG | LfuKN01ORF3670P |
| 3670 | M | M.Lfu8579ORF4165P (99% identity) | M.LfuKN01ORF3670P | |
| 3675 | DUF1517 domain-containing protein | |||
| 5775 | DUF3883 domain-containing protein | |||
| 5780 | M | M.Asp8005ORF41023P (90% identity) | M.LfuKN01ORF5780P | |
| 5785 | DUF499 domain-containing protein | |||
| 5850 | transposase | |||
| ??? | M | M.CspCR12ORF3725P (25% identity) | M.LfuKN01ORF5855P | |
| 5860 | transposase | |||
| 5975 | restriction endonuclease | |||
| ??? | M | M.Lfu8579ORF7000P (100% identity) | M.LfuKN01ORF5980P | |
| 5985 | R | Lfu8579ORF7000P (100% identity) | GACNNNGTC | LfuKN01ORF5980P |
| 5990 | C | C.Lfu8579ORF7000P (100% identity) | C.LfuKN01ORF5980P | |
| 5995 | 51 aa hypothetical protein | |||
| 6100 | 3-isopropylmalate dehydrogenase | |||
| 6105 | M | M.Asp8005ORF40961P (100% identity) | TCTAGA | M.LfuKN01ORF6105P |
| 6110 | ATPase | |||
| 6455 | CBS domain-containing protein | |||
| 6460 | C | C.Lfu8579ORF7535P (100% identity) | C.LfuKN01ORF6475P | |
| ??? | R | Lfu8579ORF7535P (100% identity) | TACGTA | LfuKN01ORF6475P |
| ??? | M | M.Lfu8579ORF7535P (100% identity) | TACGTA | M.LfuKN01ORF6475P |
| 6485 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |||
| 7310 | cobalamin biosynthesis protein CobW | |||
| 7315 | R | LinBM01ORF17350P (100% identity) | GGYRCC | LfuKN01ORF7320P |
| 7320 | M | M.Lfu8579ORF8505P (100% identity) | GGYRCC | M.LfuKN01ORF7320P |
| 7325 | 290 aa hypothetical protein | |||
| 8495 | CHAT domain-containing protein | |||
| 8500 | M | M.Lfu8579ORF10010P (100% identity) | M.LfuKN01ORF8500P | |
| 8505 | PIN/TRAM domain-containing protein | |||
| 8695 | ADP-ribosylglycohydrolase family protein | |||
| 8700 | M | M.LinBM01ORF15660P (100% identity) | TCTAGA | M.LfuKN01ORF8700P |
| 8705 | succinate dehydrogenase/fumarate reductase | |||
| 9130 | DUF2281 domain-containing protein | |||
| 9135 | RM | Asp92ORFB1P (59% identity) | LfuKN01ORF9135P | |
| 9140 | Rpn family recombination-promoting | |||
| 11995 | S-(hydroxymethyl)glutathione dehydrogenase/class | |||
| 12000 | M | M.Lfu8579ORF14050P (99% identity) | M.LfuKN01ORF12000P | |
| 12005 | NCS2 family permease | |||
| 13445 | glutathione S-transferase family protein | |||
| 13450 | M | M.LinBM01ORF10715P (100% identity) | GGTNACC | M.LfuKN01ORF13450P |
| 13455 | R | LinBM01ORF10715P (100% identity) | GGTNACC | LfuKN01ORF13450P |
| 13460 | IS200/IS605 family transposase | |||
| 14550 | allophycocyanin subunit beta | |||
| 14555 | M | M.AplC1ORF630140P (96% identity) | M.LfuKN01ORF14555P | |
| 14560 | TlyA family RNA methyltransferase | |||
| 15025 | M | M.AplDDORFE1P (100% identity) | GCSGC | M.LfuKN01ORF15025P |
| 15035 | RIP metalloprotease RseP | |||
| 17960 | integron integrase | |||
| 17965 | M | M.LinBM01ORF5260P (98% identity) | M.LfuKN01ORF17965P | |
| 17970 | R | LinBM01ORF5260P (100% identity) | CGTACG | LfuKN01ORF17965P |
| 17975 | hypothetical protein | |||
| 19085 | esterase-like activity of phytase family | |||
| 19090 | RM | AplDDORFZP (93% identity) | LfuKN01ORF19090P | |
| 19095 | response regulator | |||
| 19165 | FAD-dependent oxidoreductase | |||
| ??? | R | Lfu8579ORF23280P (100% identity) | GCTAGC | LfuKN01ORF19175P |
| 19175 | M | M.Lfu8579ORF23280P (100% identity) | GCTAGC | M.LfuKN01ORF19175P |
| 19180 | homogentisate phytyltransferase | |||
| 21140 | aminotransferase class V-fold PLP-dependent | |||
| 21145 | M | M.SplZORFRP (100% identity) | ATGCAT | M.LfuKN01ORF21145P |
| 21150 | R | AplORF1180P (92% identity) | ATGCAT | LfuKN01ORF21145P |
| 21155 | phosphoribosyltransferase | |||
| 21730 | UbiA prenyltransferase family protein | |||
| 21735 | R | LinBM01ORF1220P (91% identity) | TTCGAA | LfuKN01ORF21740P |
| 21740 | M | M.AplC1ORF102600P (100% identity) | TTCGAA | M.LfuKN01ORF21740P |
| 21745 | Ycf51 family protein | |||
| 22460 | asparagine synthetase B family protein | |||
| 22465 | M | M.AplDDDndDP (98% identity) | M.LfuKN01DndDP | |
| ??? | hypothetical protein | |||
| 22465 | DNA sulfur modification protein DndD | |||
| ??? | M | M.Apl39DndCP (84% identity) | M.LfuKN01DndCP | |
| 22480 | HNH endonuclease | |||
| 24240 | WD40 repeat domain-containing protein | |||
| 24245 | M | M.Lfu8579ORF21555P (99% identity) | M.LfuKN01ORF24245P | |
| 24250 | R | Lfu8579ORF21550P (90% identity) | LfuKN01ORF24245P | |
| 24255 | NB-ARC domain-containing protein | |||
| 24640 | DNA repair protein RecO | |||
| 24645 | R | Lfu8579ORF29160P (100% identity) | GRCGYC | LfuKN01ORF24650P |
| 24650 | M | M.LinBM01ORF26580P (100% identity) | M.LfuKN01ORF24650P | |
| 24655 | anti-sigma regulatory factor | |||
| 25745 | transposase | |||
| 25750 | RM | Asp92ORFTP (97% identity) | LfuKN01ORF25750P | |
| 25755 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16490 | 167 aa hypothetical protein | |||
| 16495 | M | M.AplC1ORF32000P (83% identity) | M.LfuKN01ORF16495P | |
| 16500 | ATP/GTP-binding protein | |||
| 16505 | R | LinBM01ORF7435P (99% identity) | LfuKN01ORF16495P | |
| 16510 | glycosyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24795 | 50 aa hypothetical protein | |||
| ??? | R | Asp8005GmrSDP (88% identity) | LfuKN01GmrDP | |
| 24810 | dynamin family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2045 | adenosylmethionine decarboxylase | |||
| 2050 | M | M.Asp8005ORF60398P (100% identity) | GATC | M.LfuKN01ORF2050P |
| 2055 | 46 aa hypothetical protein | |||