Escherichia coli KMi006 |
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Putative Escherichia coli KMi006 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
| Sequence length: | GenBank #: | |
| Chromosome: | 4,858,831 bp | CP091691 |
| plasmid pKMi006_2: | 68,938 bp | CP091693 |
REBASE acronym: EcoMi006
Org_num: 56616
All begin L6L65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3300 | HTH-type transcriptional regulator Cbl | |||
| 3305 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoMi006ORF3305P |
| 3310 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoMi006ORF3305P |
| 3315 | restriction system-associated AAA family ATPase | |||
| 3925 | IS1 family transposase | |||
| 3930 | R | EcosNDM5ORF9185P (99% identity) | EcoMi006ORF3930P | |
| 3935 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3615 | phosphohydrolase | |||
| 3620 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoMi006DcmP |
| 3625 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoMi006DcmP |
| 3630 | drug/metabolite exporter YedA | |||
| 12465 | phage holin, lambda family | |||
| 12470 | M | M.SflSTLE1ORF5465P (100% identity) | M.EcoMi006ORF12470P | |
| 12475 | 95 aa hypothetical protein | |||
| 14350 | HNH endonuclease | |||
| 14355 | R | Sso8ORF19860P (100% identity) | EcoMi006ORF14355P | |
| 14360 | 100 aa hypothetical protein | |||
| 19240 | cell division protein DamX | |||
| 19245 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMi006DamP |
| 19250 | ribulose-phosphate 3-epimerase | |||
| 19865 | DUF2556 family protein | |||
| 19870 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoMi006ORF19870P |
| 19875 | DNA-binding transcriptional regulator Fis | |||
| plasmid pKMi006_2 | ||||
| 24805 | 73 aa hypothetical protein | |||
| 24810 | M | M.Xca80ORFEP (100% identity) | M.EcoMi006ORF24810P | |
| 24815 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14360 | 100 aa hypothetical protein | |||
| 14365 | R | SflN116ORF19490P (100% identity) | GAACC | EcoMi006ORF14370P |
| 14370 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoMi006ORF14370P |
| 14375 | SNF2-related protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12215 | DinI family protein | |||
| 12220 | R | Ecop10BGmrSDP (100% identity) | EcoMi006GmrSDP | |
| 12225 | 28 aa hypothetical protein | |||