Escherichia coli KFu019 |
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Putative Escherichia coli KFu019 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
| Sequence length: | GenBank #: | |
| Chromosome: | 4,868,848 bp | CP091700 |
| plasmid pKFu019_2: | 58,919 bp | CP091699 |
REBASE acronym: EcoFu019
Org_num: 56608
All begin L6L55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24010 | integrase core domain-containing protein | |||
| 24015 | M | M.EcoD22ORF21000P (100% identity) | M.EcoFu019ORF24015P | |
| 24020 | S | S.EcoD22ORF21000P (99% identity) | S.EcoFu019ORF24015P | |
| 24025 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3615 | endonuclease VII domain-containing protein | |||
| 3620 | M | M.KpnMGH83ORFAP (92% identity) | M.EcoFu019ORF3620P | |
| 3625 | C | C.KpnMGH83ORFAP (95% identity) | C.EcoFu019ORF3620P | |
| 3630 | R | KpnMGH83ORFAP (83% identity) | EcoFu019ORF3620P | |
| 3635 | site-specific integrase | |||
| 3720 | IS21-like element ISEc12 family helper ATPase | |||
| 3725 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoFu019ORF3725P |
| 3730 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoFu019ORF3725P |
| 3735 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoFu019ORF3725P |
| 3740 | McrC family protein | |||
| 8540 | TraR/DksA family transcriptional regulator | |||
| 8545 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoFu019ORF8545P |
| 8550 | replication endonuclease | |||
| 10105 | TrmB family transcriptional regulator | |||
| 10110 | M | M.EcoCO12ORF13575P (100% identity) | M.EcoFu019ORF10110P | |
| 10125 | IS66 family insertion sequence element accessory | |||
| 14525 | drug/metabolite exporter YedA | |||
| 14530 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoFu019DcmP |
| 14535 | M | M.Ecoi648DcmP (100% identity) | CCWGG | M.EcoFu019DcmP |
| 14540 | phosphohydrolase | |||
| 14860 | class II holin family protein | |||
| 14885 | M | M.Eco38C23ORF1630P (99% identity) | M.EcoFu019ORF14885P | |
| 14890 | TrmB family transcriptional regulator | |||
| 18050 | PerC family transcriptional regulator | |||
| 18055 | M | M.EcoS44ORF14965P (100% identity) | M.EcoFu019ORF18055P | |
| 18060 | antA/AntB antirepressor family protein | |||
| 21995 | DNA-binding transcriptional regulator Fis | |||
| 22000 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoFu019ORF22000P |
| 22005 | DUF2556 family protein | |||
| 22550 | ribulose-phosphate 3-epimerase | |||
| 22555 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoFu019DamP |
| 22560 | cell division protein DamX | |||
| plasmid pKFu019_2 | ||||
| 570 | 97 aa hypothetical protein | |||
| 575 | M | M.Xca80ORFEP (100% identity) | M.EcoFu019ORF575P | |
| 580 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3735 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3740 | R | EcosS9McrCP (100% identity) | EcoFu019McrCP | |
| 3745 | R | EcosS3McrBP (100% identity) | EcoFu019McrBP | |
| 3750 | glycosyltransferase | |||