Escherichia coli KGu016 |
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Putative Escherichia coli KGu016 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
| Sequence length: | GenBank #: | |
| Chromosome: | 5,126,687 bp | CP091704 |
| plasmid pKGu016_1: | 100,940 bp | CP091705 |
| plasmid pKGu016_2: | 69,395 bp | CP091706 |
REBASE acronym: EcoGu016
Org_num: 56612
All begin L6L59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20690 | DUF262 domain-containing HNH endonuclease family | |||
| 20695 | R | EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | EcoGu016ORF20700P |
| 20700 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoGu016ORF20700P |
| 20705 | S | S.EcoZ151ORF20685P (100% identity) | CCANNNNNNNNNTTGG | S.EcoGu016ORF20700P |
| 20710 | endoribonuclease SymE | |||
| 20925 | DUF4942 domain-containing protein | |||
| 20930 | M | M.EcoZ151ORF20915P (100% identity) | M.EcoGu016ORF20930P | |
| 20935 | S | S.EcoI605ORF22375P (100% identity) | S.EcoGu016ORF20930P | |
| 20940 | R | EcoZ151ORF20915P (100% identity) | EcoGu016ORF20930P | |
| 20950 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoGu016ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 9595 | phosphohydrolase | |||
| 9600 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoGu016DcmP |
| 9605 | V | V.EcosE1DcmP (74% identity) | V.EcoGu016DcmP | |
| 9610 | drug/metabolite exporter YedA | |||
| 20905 | HNH endonuclease | |||
| 20910 | R | EcoZ151ORF20895P (100% identity) | EcoGu016ORF20910P | |
| 20915 | McrC family protein | |||
| 22565 | class II holin family protein | |||
| 22570 | M | M.Sso63633ORF22290P (100% identity) | M.EcoGu016ORF22570P | |
| 22575 | 67 aa hypothetical protein | |||
| 22605 | LexA family transcriptional regulator | |||
| 22610 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoGu016ORF22610P |
| 22615 | 28 aa hypothetical protein | |||
| plasmid pKGu016_1 | ||||
| 25075 | 73 aa hypothetical protein | |||
| 25080 | M | M.Sen21978ORF23935P (100% identity) | M.EcoGu016ORF25080P | |
| 25085 | 103 aa hypothetical protein | |||
| plasmid pKGu016_2 | ||||
| 25300 | 103 aa hypothetical protein | |||
| 25305 | M | M.Sfl7ORF23565P (100% identity) | M.EcoGu016ORF25305P | |
| 25310 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20710 | endoribonuclease SymE | |||
| 20715 | R | EcoP666GmrSDP (100% identity) | EcoGu016GmrSDP | |
| 20720 | R | SflLIN8GmrSDP (42% identity) | EcoGu016GmrSP | |
| 20725 | 15 aa hypothetical protein | |||
| 20910 | HNH endonuclease | |||
| 20915 | R | EcoZ151McrCP (100% identity) | EcoGu016McrCP | |
| 20920 | R | EcoZ151McrBP (100% identity) | EcoGu016McrBP | |
| 20925 | DUF4942 domain-containing protein | |||