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Putative Shigella flexneri STLIN_8 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,751,737 bp
GenBank #: CP058796
REBASE acronym: SflLIN8
Org_num: 56711
All begin HZT12_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
18465 | HigA family addiction module antidote protein | |||
18470 | R | EroN260ORF10120P (99% identity) | SflLIN8ORF18485P | |
18475 | DUF4268 domain-containing protein | |||
18480 | S | S.Ecl42ORF4790P (100% identity) | S.SflLIN8ORF18485P | |
18485 | M | M.Ecl42ORF4790P (100% identity) | M.SflLIN8ORF18485P | |
18490 | GNAT family N-acetyltransferase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2285 | DUF2556 family protein | |||
2290 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.SflLIN8ORF2290P |
2295 | DNA-binding transcriptional regulator Fis | |||
9275 | phosphohydrolase | |||
9280 | M | M.SspS13DcmP (100% identity) | CCWGG | M.SflLIN8DcmP |
9285 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.SflLIN8DcmP |
9290 | drug/metabolite exporter YedA | |||
15445 | replication endonuclease | |||
15450 | M | M.EcoE47ORF17645P (100% identity) | GATC | M.SflLIN8ORF15450P |
15455 | TraR/DksA family transcriptional regulator | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
9070 | IS1 family transposase | |||
9075 | M | M.SenMAC15ORF10230P (8% identity) | M.SflLIN8ORF9075P | |
9080 | R | Cfr354ORF32890P (99% identity) | SflLIN8ORF9075P | |
9085 | shufflon system plasmid conjugative transfer | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20175 | endoribonuclease SymE | |||
20180 | R | Eco8S19GmrSDP (100% identity) | SflLIN8GmrSDP | |
20185 | DUF1127 domain-containing protein |