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Putative Shigella flexneri STLIN_17 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,626,646 bp
GenBank #: CP058780
REBASE acronym: SflLIN17
Org_num: 56708
All begin HZT03_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9025 | 388 aa hypothetical protein | |||
9030 | M | M.EcoMB56ORF8945P (100% identity) | M.SflLIN17ORF9030P | |
9035 | S | S.EcosS142ORF17720P (99% identity) | S.SflLIN17ORF9030P | |
9040 | YecA family protein | |||
9045 | cold shock domain-containing protein | |||
9050 | R | EcoG5ORF9385P (99% identity) | SflLIN17ORF9030P | |
9055 | M48 family metallopeptidase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2135 | DUF2556 family protein | |||
2140 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.SflLIN17ORF2140P |
2145 | DNA-binding transcriptional regulator Fis | |||
3135 | DEAD/DEAH box helicase | |||
3140 | RM | Sensp14152ORF3460P (100% identity) | SflLIN17ORF3140P | |
3145 | transposase | |||
8705 | phosphohydrolase | |||
8710 | M | M.SspS13DcmP (100% identity) | CCWGG | M.SflLIN17DcmP |
8715 | V | V.SsoSE61DcmP (99% identity) | V.SflLIN17DcmP | |
8720 | drug/metabolite exporter YedA | |||
14470 | replication endonuclease | |||
14475 | M | M.Sen96147ORF7010P (100% identity) | GATC | M.SflLIN17ORF14475P |
14480 | TraR/DksA family transcriptional regulator | |||
17400 | phage holin, lambda family | |||
17405 | M | M.SensTJX21ORF13615P (100% identity) | M.SflLIN17ORF17405P | |
17410 | 92 aa hypothetical protein | |||
17435 | LexA family transcriptional regulator | |||
17440 | M | M.Sfl670ORF22500P (100% identity) | GATC | M.SflLIN17ORF17440P |
17445 | PerC family transcriptional regulator | |||
20565 | phage lysis protein EssD | |||
20570 | M | M.Sso63633ORF22290P (100% identity) | M.SflLIN17ORF20570P | |
20575 | TrmB family transcriptional regulator | |||
20610 | LexA family transcriptional regulator | |||
20615 | M | M.SflFF3ORF21935P (100% identity) | GATC | M.SflLIN17ORF20615P |
20620 | PerC family transcriptional regulator |