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Putative Shigella flexneri STLE3 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Sequence length: | GenBank #: | |
Chromosome: | 4,785,827 bp | CP058828 |
plasmid unnamed1: | 169,932 bp | CP058829 |
REBASE acronym: SflSTLE3
Org_num: 56698
All begin HZT20_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19320 | restriction endonuclease | |||
19325 | M | M.EcoZ063ORF19775P (100% identity) | AGCANNNNNNTGA | M.SflSTLE3ORF19325P |
19330 | S | S.EcoSTEC506ORF20895P (100% identity) | AGCANNNNNNTGA | S.SflSTLE3ORF19325P |
19335 | R | EcoSF10ORF15975P (100% identity) | AGCANNNNNNTGA | SflSTLE3ORF19325P |
19340 | endoribonuclease SymE | |||
plasmid unnamed1 | ||||
22765 | IS3 family transposase | |||
22770 | R | SflFF64ORF5405P (100% identity) | SflSTLE3ORF22785P | |
22775 | DUF4268 domain-containing protein | |||
22780 | S | S.Sen557928ORF18960P (98% identity) | S.SflSTLE3ORF22785P | |
22785 | M | M.Sen557928ORF18960P (100% identity) | M.SflSTLE3ORF22785P | |
22790 | SPFH/Band 7/PHB domain protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2505 | DUF2556 family protein | |||
2510 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.SflSTLE3ORF2510P |
2515 | DNA-binding transcriptional regulator Fis | |||
3955 | DEAD/DEAH box helicase | |||
3960 | RM | EcoR0233ORF3995P (99% identity) | SflSTLE3ORF3960P | |
8760 | HD domain-containing protein | |||
8765 | M | M.EcosS1DcmP (100% identity) | CCWGG | M.SflSTLE3DcmP |
8770 | V | V.EcosS1DcmP (100% identity) | CCWGG | V.SflSTLE3DcmP |
8775 | drug/metabolite exporter YedA | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19315 | BrnT family toxin | |||
19320 | R | EcoZ063MrrP (100% identity) | SflSTLE3MrrP | |
19325 | type I restriction-modification system subunit |