Escherichia coli A13 |
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Putative Escherichia coli A13 RM systems
Ref: Kang,Y. et al. Brief Bioinform 22 (4) (2021)
REBASE ref # 34039
Complete sequence: 4,630,346 bp
GenBank #: CP028761
REBASE acronym: EcoA13
Org_num: 56567
All begin AOY66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3570 | endoribonuclease SymE | |||
| 3575 | S | S.Eco572ORF19435P (100% identity) | CGAYNNNNNNNNTGCC | S.EcoA13I |
| 3580 | M | M.SspS13ORF3945P (100% identity) | CGAYNNNNNNNNTGCC | M.EcoA13I |
| 3585 | R | EcoUTI89IIP (100% identity) | CGAYNNNNNNNNTGCC | EcoA13IP |
| 3590 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3310 | type III restriction-modification system | |||
| 3315 | R | EcosLF82ORF3205P (100% identity) | EcoA13ORF3315P | |
| 3320 | HNH endonuclease | |||
| 13715 | drug/metabolite exporter YedA | |||
| 13720 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoA13DcmP |
| 13725 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoA13DcmP |
| 13730 | phosphohydrolase | |||
| 20775 | Fis family transcriptional regulator | |||
| 20780 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoA13ORF20780P |
| 20785 | DUF2556 domain-containing protein | |||
| 21400 | ribulose-phosphate 3-epimerase | |||
| 21405 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoA13Dam |
| 21410 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3300 | 94 aa hypothetical protein | |||
| 3305 | M | M.EcosLF82ORF3195P (100% identity) | CRACAG | M.EcoA13II |
| 3310 | R | EcosLF82ORF3195P (100% identity) | CRACAG | EcoA13IIP |
| 3315 | 129 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | 26 aa hypothetical protein | |||
| 3565 | R | Eco572GmrSDP (100% identity) | EcoA13GmrSDP | |
| 3570 | endoribonuclease SymE | |||