Escherichia coli A33 |
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Putative Escherichia coli A33 RM systems
Ref: Kang,Y. et al. Brief Bioinform 22 (4) (2021)
REBASE ref # 34039
Complete sequence: 5,117,905 bp
GenBank #: CP028742
REBASE acronym: EcosA33
Org_num: 56588
All begin AOY86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | restriction endonuclease | |||
| 3265 | R | EcoTE113ORF159P (100% identity) | GAGNNNNNNGTC | EcosA33IP |
| 3270 | S | S.EcosA4I (100% identity) | GAGNNNNNNGTC | S.EcosA33I |
| 3275 | M | M.EcosA4I (100% identity) | GAGNNNNNNGTC | M.EcosA33I |
| 3280 | DUF4942 domain-containing protein | |||
| 3555 | endoribonuclease SymE | |||
| 3560 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | EcosA33IIP |
| 3565 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.EcosA33II |
| 3570 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.EcosA33II |
| 3575 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3290 | restriction endonuclease | |||
| 3295 | R | EcosA4ORF22115P (100% identity) | EcosA33ORF3295P | |
| 3300 | HNH endonuclease | |||
| 3815 | PerC family transcriptional regulator | |||
| 3820 | M | M.EcoYDC107ORF3146P (100% identity) | GATC | M.EcosA33ORF3820P |
| 3825 | LexA family transcriptional regulator | |||
| 14600 | drug/metabolite exporter YedA | |||
| 14605 | V | V.EcosA4DcmP (100% identity) | V.EcosA33DcmP | |
| 14610 | M | M.EcosA32DcmP (100% identity) | CCWGG | M.EcosA33DcmP |
| 14615 | phosphohydrolase | |||
| 17865 | 175 aa hypothetical protein | |||
| 17870 | M | M.EcoR44ORF23150P (98% identity) | M.EcosA33ORF17870P | |
| 17875 | eae-like domain protein | |||
| 17930 | PerC family transcriptional regulator | |||
| 17935 | M | M.EcoR57ORF13975P (100% identity) | M.EcosA33ORF17935P | |
| 17940 | DUF1382 domain-containing protein | |||
| 22915 | Fis family transcriptional regulator | |||
| 22920 | M | M.EcoTE113ORF3626P (100% identity) | ATGCAT | M.EcosA33ORF22920P |
| 22925 | DUF2556 domain-containing protein | |||
| 23540 | ribulose-phosphate 3-epimerase | |||
| 23545 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosA33DamP |
| 23550 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | DUF4942 domain-containing protein | |||
| 3285 | R | EcosA4McrBP (100% identity) | EcosA33McrBP | |
| 3290 | R | EcosA4McrCP (100% identity) | EcosA33McrCP | |
| 3295 | HNH endonuclease | |||
| 3570 | DNA methyltransferase | |||
| 3575 | R | EcosA4MrrP (99% identity) | EcosA33MrrP | |
| 3580 | 95 aa hypothetical protein | |||