Escherichia coli A34 |
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Putative Escherichia coli A34 RM systems
Ref: Kang,Y. et al. Brief Bioinform 22 (4) (2021)
REBASE ref # 34039
Complete sequence: 4,979,481 bp
GenBank #: CP028741
REBASE acronym: EcoA34
Org_num: 56589
All begin AOY87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3005 | endoribonuclease SymE | |||
| 3010 | S | S.KpaCM1ORF24450P (67% identity) | ACAYNNNNNNNRTRTC | S.EcoA34I |
| 3015 | M | M.SspS13ORF3945P (100% identity) | ACAYNNNNNNNRTRTC | M.EcoA34I |
| 3020 | R | SflN107ORF19785P (99% identity) | ACAYNNNNNNNRTRTC | EcoA34IP |
| 3025 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2715 | HNH endonuclease | |||
| 2720 | R | EcoA31SspFP (100% identity) | EcoA34SspFP | |
| 2725 | R | EcoA31SspGP (99% identity) | EcoA34SspGP | |
| 2730 | R | Eco630SspHP (99% identity) | EcoA34SspHP | |
| 2735 | 278 aa hypothetical protein | |||
| 2740 | M | M.EcoA31SspCP (100% identity) | M.EcoA34SspCP | |
| 2745 | DUF4007 domain-containing protein | |||
| 9555 | phosphohydrolase | |||
| 9560 | M | M.EcoC388DcmP (100% identity) | CCWGG | M.EcoA34DcmP |
| 9565 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.EcoA34DcmP |
| 9570 | EamA family transporter | |||
| 15910 | 86 aa hypothetical protein | |||
| 15915 | R | EcoZ910ORF13770P (98% identity) | GCCGGC | EcoA34ORF15920P |
| 15920 | M | M.EcoZ910ORF13770P (97% identity) | GCCGGC | M.EcoA34ORF15920P |
| 15925 | beta family protein | |||
| 22975 | Fis family transcriptional regulator | |||
| 22980 | M | M.EcoW102ORF2375P (100% identity) | ATGCAT | M.EcoA34ORF22980P |
| 22985 | DUF2556 domain-containing protein | |||
| 23885 | ribulose-phosphate 3-epimerase | |||
| 23890 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA34Dam |
| 23895 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2995 | DUF1127 domain-containing protein | |||
| 3000 | R | Efe9LTGmrSDP (99% identity) | EcoA34GmrSDP | |
| 3005 | endoribonuclease SymE | |||