Bacteroides thetaiotaomicron VPI 5482 |
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Putative Bacteroides thetaiotaomicron VPI 5482 RM systems
Ref: Mores,C.R. et al. unpublished
REBASE ref # 34001
Complete sequence: 6,280,921 bp
GenBank #: CP092641
REBASE acronym: BthI5482
Org_num: 56194
All begin MJ393_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11900 | DUF262 domain-containing HNH endonuclease family | |||
| 11905 | R | Msa17ORFY1P (100% identity) | BthI5482ORF11910P | |
| 11910 | M | M.Msa17ORFY1P (100% identity) | M.BthI5482ORF11910P | |
| 11915 | S | S1.BthVORF4518P (100% identity) | CCAYNNNNNNRTTT | S1.BthI5482ORF11910P |
| 11920 | S | S1.Msa17ORFY1P (100% identity) | S2.BthI5482ORF11910P | |
| 11925 | tyrosine-type recombinase/integrase | |||
| 11930 | S | S3.BthVORF4518P (100% identity) | S3.BthI5482ORF11910P | |
| 11935 | S | S3.Msa17ORFY1P (100% identity) | S4.BthI5482ORF11910P | |
| 11940 | DNA-binding protein | |||
| 11985 | helix-turn-helix domain-containing protein | |||
| 11990 | R | Msa17ORFB2P (100% identity) | BthI5482ORF12005P | |
| 11995 | DUF5655 domain-containing protein | |||
| 12000 | DUF262 domain-containing HNH endonuclease family | |||
| 12005 | M | M.Msa17ORFB2P (100% identity) | M.BthI5482ORF12005P | |
| 12010 | virulence RhuM family protein | |||
| 12015 | S | S1.Msa17ORFB2P (99% identity) | S1.BthI5482ORF12005P | |
| 12020 | S | S2.Msa17ORFB2P (100% identity) | S2.BthI5482ORF12005P | |
| 12025 | S | S2.Bfr642ORF9985P (100% identity) | S3.BthI5482ORF12005P | |
| 12030 | S | S4.Msa17ORFB2P (100% identity) | S4.BthI5482ORF12005P | |
| 12035 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | DGQHR domain-containing protein | |||
| 1065 | M | M.Msa17ORFTP (100% identity) | RGATCY | M.BthI5482ORF1065P |
| 1070 | AraC family transcriptional regulator | |||
| 9360 | 462 aa hypothetical protein | |||
| 9365 | M | M.Pvu626ORF9540P (100% identity) | M.BthI5482ORF9365P | |
| 9370 | AAA family ATPase | |||
| 12445 | 215 aa hypothetical protein | |||
| 12450 | RM | Msa17ORFE2P (100% identity) | BthI5482ORF12450P | |
| 12455 | phospholipase D-like domain-containing protein | |||
| 13090 | helix-turn-helix transcriptional regulator | |||
| 13095 | M | M.Msa17ORFGP (100% identity) | M.BthI5482ORF13095P | |
| 13100 | ATP-binding protein | |||
| 23085 | 55 aa hypothetical protein | |||
| 23090 | RM | Msa17ORFE1P (97% identity) | BthI5482ORF23090P | |
| 23095 | transposase | |||