Escherichia coli EC5502 |
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Putative Escherichia coli EC5502 RM systems
Ref: Huang,J. and Li,X. unpublished
REBASE ref # 33491
| Sequence length: | GenBank #: | |
| Chromosome: | 5,005,213 bp | CP092647 |
| plasmid pEC5502-2: | 99,284 bp | CP092645 |
| plasmid pEC5502-NDM5: | 256,955 bp | CP092646 |
REBASE acronym: Eco5502
Org_num: 56198
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.Eco5502ORFCP |
| ??? | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco5502ORFCP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | V | V.Sdy49550DcmP (100% identity) | CCWGG | V.Eco5502DcmP |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco5502DcmP |
| ??? | M | M.EcosHSORF14470P (99% identity) | GATC | M.Eco5502ORFHP |
| ??? | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5502ORFGP |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5502DamP |
| ??? | R | SflFF24DptFP (100% identity) | Eco5502DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | dnd system-associated protein 2 | |||
| ??? | R | SflFF24DptGP (100% identity) | Eco5502DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | R | EcosEC5DptHP (100% identity) | Eco5502DptHP | |
| ??? | DNA sulfur modification protein DndE | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | M | M.SflFF24DndEP (100% identity) | M.Eco5502DndEP | |
| ??? | Sulphur transferase DndC, putative | |||
| ??? | DNA sulfur modification protein DndE | |||
| ??? | M | M.EcoGTEN97DndDP (100% identity) | M.Eco5502DndDP | |
| ??? | Sulphur transferase DndC, putative | |||
| ??? | Sulphur transferase DndC, putative | |||
| ??? | M | M.SflFF24DndCP (100% identity) | M.Eco5502DndCP | |
| ??? | DNA sulfur modification protein DndB | |||
| ??? | Sulphur transferase DndC, putative | |||
| ??? | M | M.SflFF24DndBP (100% identity) | M.Eco5502DndBP | |
| ??? | R | Econumer3ORFAP (100% identity) | Eco5502ORFFP | |
| plasmid pEC5502-2 | ||||
| ??? | M | M.EcoEcC25ORFAP (100% identity) | M.Eco5502ORFJP | |
| ??? | M | M.Sen10729ORF23295P (96% identity) | M.Eco5502ORFBP | |
| plasmid pEC5502-NDM5 | ||||
| ??? | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco5502ORFIP |
| ??? | M | M.YpsF1ORFBP (100% identity) | M.Eco5502ORFEP | |
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco5502ORFDP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Ecows53McrCP (100% identity) | Eco5502McrCP | |
| ??? | R | SflN101McrBP (100% identity) | Eco5502McrBP | |