Mannheimia haemolytica 0729 |
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Putative Mannheimia haemolytica 0729 RM systems
Ref: Boguski,M. and Hill,J.E. unpublished
REBASE ref # 34024
Complete sequence: 2,591,238 bp
GenBank #: CP059327
REBASE acronym: Mha0729
Org_num: 56464
All begin H1D03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 120 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 125 | M | M.MhaD171ORF10245P (100% identity) | M.Mha0729ORF125P | |
| 130 | S | S.Mha0745ORF8355P (99% identity) | GAYNNNNNNTAYG | S.Mha0729ORF125P |
| 135 | anticodon nuclease | |||
| 140 | R | Mha0728ORF10385P (99% identity) | Mha0729ORF125P | |
| 145 | ABC transporter ATP-binding protein | |||
| 4670 | YacL family protein | |||
| 4675 | M | M.MhaD171ORF2370P (99% identity) | M.Mha0729ORF4675P | |
| 4680 | S | S.Mhas184ORF7710P (99% identity) | TGAANNNNNTTC | S.Mha0729ORF4675P |
| 4685 | FRG domain-containing protein | |||
| 4690 | R | Mha0728ORF2040P (100% identity) | Mha0729ORF4675P | |
| 4695 | bifunctional [glutamate--ammonia | |||
| 7510 | bifunctional glutamate--cysteine ligase | |||
| 7515 | S | S.Mha9712V (99% identity) | GNGAYNNNNNNNRTTG | S2.Mha0729ORF7535P |
| 7520 | tyrosine-type recombinase/integrase | |||
| 7525 | S | S1.Pba12565ORF1955P (87% identity) | GNGAYNNNNNNNNTGT | S1.Mha0729ORF7535P |
| 7530 | DNA binding domain-containing protein | |||
| 7535 | M | M.Mha0768ORF40P (99% identity) | M.Mha0729ORF7535P | |
| 7540 | R | Mha0597ORF12245P (99% identity) | Mha0729ORF7535P | |
| 7545 | phosphatidylserine decarboxylase | |||
| 12595 | methionine synthase | |||
| 12600 | M | M.MhaD171ORF9810P (99% identity) | M.Mha0729ORF12600P | |
| 12605 | S | S.MhaD171ORF9810P (64% identity) | S1.Mha0729ORF12600P | |
| 12610 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha0729ORF12600P |
| 12615 | 211 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 620 | enoyl-CoA hydratase | |||
| 625 | M | M.MhaD171ORF10745P (87% identity) | M.Mha0729ORF625P | |
| 630 | DNA-binding domain-containing protein | |||
| 4060 | DUF1367 family protein | |||
| 4065 | M | M.Mha39394ORF7105P (100% identity) | M.Mha0729ORF4065P | |
| 4070 | conserved phage C-terminal domain-containing | |||
| 5630 | sodium-dependent transporter | |||
| 5635 | M | M.MhaD171ORF3310P (99% identity) | GATC | M.Mha0729ORF5635P |
| 5640 | 3-dehydroquinate synthase | |||
| 6380 | DUF968 domain-containing protein | |||
| 6385 | M | M.Mha9712ORF539P (100% identity) | M.Mha0729ORF6385P | |
| 6390 | conserved phage C-terminal domain-containing | |||
| 6495 | Com family DNA-binding transcriptional | |||
| 6500 | M | M.MhaD171ORF4180P (100% identity) | BA | M.Mha0729ORF6500P |
| 6505 | 63 aa hypothetical protein | |||
| 8190 | replication protein | |||
| 8195 | M | M.MhaA2ORF1731P (100% identity) | GATC | M.Mha0729ORF8195P |
| 8200 | DUF1367 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2895 | IS481 family transposase | |||
| 2900 | R | MhaD171ORF875P (100% identity) | GACAT | Mha0729ORF2905P |
| ??? | M | M.Mha0745ORF11135P (99% identity) | GACAT | M.Mha0729ORF2905P |
| 2915 | trimethylamine-N-oxide reductase TorA | |||
| 4375 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 4380 | R | Mha0728ORF1750P (100% identity) | GTTAAT | Mha0729ORF4385P |
| 4385 | M | M.Mha0597ORF8940P (99% identity) | GTTAAT | M.Mha0729ORF4385P |
| 4390 | adenine methyltransferase | |||