Shigella flexneri SWHIN_107 |
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Putative Shigella flexneri SWHIN_107 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,810,340 bp
GenBank #: CP055099
REBASE acronym: SflN107
Org_num: 55456
All begin HUZ84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19775 | 322 aa hypothetical protein | |||
| 19780 | R | SflN104ORF19590P (100% identity) | SflN107ORF19785P | |
| 19785 | M | M.SspS13ORF3945P (100% identity) | M.SflN107ORF19785P | |
| 19790 | S | S.SflN104ORF19590P (100% identity) | S.SflN107ORF19785P | |
| 19795 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1625 | cell division protein DamX | |||
| 1630 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflN107DamP |
| 1635 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.SflN107ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 8855 | HD domain-containing protein | |||
| 8860 | M | M.SflN104DcmP (100% identity) | CCWGG | M.SflN107DcmP |
| 8865 | V | V.SflN104DcmP (100% identity) | V.SflN107DcmP | |
| 8870 | drug/metabolite exporter YedA | |||
| 17950 | phage holin, lambda family | |||
| 17955 | M | M.SflN104ORF17770P (100% identity) | M.SflN107ORF17955P | |
| 17960 | 67 aa hypothetical protein | |||
| 17985 | LexA family transcriptional regulator | |||
| 17990 | M | M.SflN104ORF17805P (100% identity) | GATC | M.SflN107ORF17990P |
| 17995 | PerC family transcriptional regulator | |||
| 19975 | sialate O-acetylesterase | |||
| 19980 | R | SflN104ORF19785P (100% identity) | SflN107ORF19980P | |
| 19985 | IS1 family transposase | |||
| 19995 | integrase arm-type DNA-binding domain-containing | |||
| 20000 | V | V.SflN104ORF19825P (100% identity) | V.SflN107ORF20020P | |
| 20005 | 192 aa hypothetical protein | |||
| 20010 | DEAD/DEAH box helicase family protein | |||
| 20015 | ATP-binding protein | |||
| 20020 | M | M.SflN104ORF19825P (100% identity) | M.SflN107ORF20020P | |
| 20025 | R | SflN104ORF19825P (100% identity) | SflN107ORF20020P | |
| 20030 | 296 aa hypothetical protein | |||
| 20235 | conjugal transfer protein TraG N-terminal | |||
| 20240 | R | SflN104ORF20045P (100% identity) | SflN107ORF20240P | |
| 20245 | cell surface composition regulator GlgS | |||