Klebsiella pneumoniae STEFF_9 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae STEFF_9 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 5,275,543 bp | CP055162 |
| plasmid unnamed1: | 260,949 bp | CP055163 |
REBASE acronym: KpnFF9
Org_num: 55398
All begin HUZ51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3285 | 615 aa hypothetical protein | |||
| 3290 | R | Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | KpnFF9ORF3300P |
| 3295 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S1.KpnFF9ORF3300P |
| 3300 | M | M.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | M.KpnFF9ORF3300P |
| 3305 | restriction endonuclease subunit S | |||
| 20450 | IS4 family transposase | |||
| 20455 | M | M.EcoNT1N34ORFCP (78% identity) | M.KpnFF9ORF20455P | |
| 20460 | GTPase family protein | |||
| plasmid unnamed1 | ||||
| 25965 | 71 aa hypothetical protein | |||
| 25970 | R | Kqu688ORF26145P (100% identity) | CTANNNNNNCTG | KpnFF9ORF25980P |
| 25975 | S | S.Kqu688ORF26145P (100% identity) | CTANNNNNNCTG | S.KpnFF9ORF25980P |
| 25980 | M | M.KpnKPN115ORF26525P (30% identity) | CTANNNNNNCTG | M.KpnFF9ORF25980BP |
| 25985 | IS5 family transposase | |||
| 25990 | M | M.Pge386ORF25140P (70% identity) | CTANNNNNNCTG | M.KpnFF9ORF25980AP |
| 25995 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.KspC31DamP (100% identity) | GATC | M.KpnFF9DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 6045 | TraR/DksA family transcriptional regulator | |||
| 6050 | M | M.Kpnu34ORF7640P (100% identity) | GATC | M.KpnFF9ORF6050P |
| 6055 | replication endonuclease | |||
| 7410 | helix-turn-helix domain-containing protein | |||
| 7415 | M | M.KpnKpC11ORF7830P (100% identity) | M.KpnFF9ORF7415P | |
| 7420 | RusA family crossover junction | |||
| 9220 | phosphohydrolase | |||
| 9225 | M | M.Ksp54798DcmP (100% identity) | CCWGG | M.KpnFF9DcmP |
| 9230 | V | V.Kpns148DcmP (100% identity) | V.KpnFF9DcmP | |
| 9235 | drug/metabolite exporter YedA | |||
| 15645 | replication endonuclease | |||
| 15650 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.KpnFF9ORF15650P |
| 15655 | 3-5 exoribonuclease | |||
| plasmid unnamed1 | ||||
| 26620 | IS1 family transposase | |||
| 26625 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.KpnFF9ORF26625P |
| 26630 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnFF9ORF26625P |
| 26635 | EAL domain-containing protein | |||