Campylobacter jejuni subsp. jejuni 14991B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Campylobacter jejuni subsp. jejuni 14991B RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 33506
| Sequence length: | GenBank #: | |
| Chromosome: | 1,698,892 bp | CP092020 |
| plasmid p14991B: | 50,683 bp | CP092021 |
REBASE acronym: Cco14991B
Org_num: 54361
All begin MA849_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3480 | molecular chaperone DnaK | |||
| 3485 | M | M.Cje15597AORF3450P (99% identity) | M.Cco14991BORF3485P | |
| 3490 | S | S.Csp93238ORF3910P (69% identity) | S.Cco14991BORF3485P | |
| 3495 | 314 aa hypothetical protein | |||
| 3500 | R | Cco11601ORF230P (100% identity) | Cco14991BORF3485P | |
| 3505 | MBL fold metallo-hydrolase | |||
| 7795 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7800 | R | Cje2058ORF1021P (100% identity) | GCANNNNNRTTA | Cco14991BORF7820P |
| 7805 | ATP-binding protein | |||
| 7810 | S | S.Csp9ORF7895P (100% identity) | GCANNNNNRTTA | S.Cco14991BORF7820P |
| 7815 | helix-turn-helix domain-containing protein | |||
| 7820 | M | M1.Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | M.Cco14991BORF7820P |
| 7825 | SAM-dependent DNA methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 960 | translation initiation factor IF-3 | |||
| 965 | M | M.CjeCJ090ORF845P (100% identity) | RAATTY | M.Cco14991BORF965P |
| 970 | autotransporter outer membrane beta-barrel | |||
| 1150 | dihydroorotase | |||
| 1155 | RM | Cje65408ORF7745P (97% identity) | Cco14991BORF1155P | |
| 1160 | class I SAM-dependent methyltransferase | |||
| 3220 | acetate kinase | |||
| 3225 | RM | Cje2005ORF188P (99% identity) | GKAAYG | Cco14991BORF3225P |
| 3230 | 163 aa hypothetical protein | |||
| plasmid p14991B | ||||
| 8735 | response regulator | |||
| 8740 | M | M.CjeJ114ORF17230P (100% identity) | M.Cco14991BORF8740P | |
| 8745 | helicase RepA family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1275 | lipid-A-disaccharide synthase | |||
| 1280 | R | Cje75ORF1375P (100% identity) | Cco14991BORF1290P | |
| 1285 | caspase family protein | |||
| 1290 | M | M.CjeS27ORF1355P (100% identity) | M.Cco14991BORF1290P | |
| 1295 | lipid-A-disaccharide synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 650 | ribosome maturation factor RimP | |||
| 655 | R | Cje15597AMcrB2P (100% identity) | Cco14991BMcrB2P | |
| 660 | R | Cje15597AMcrC2P (99% identity) | Cco14991BMcrC2P | |
| 665 | metal ABC transporter permease | |||
| 7690 | 215 aa hypothetical protein | |||
| 7695 | R | Cje15597AMcrBP (100% identity) | Cco14991BMcrBP | |
| 7700 | R | Cje15597AMcrCP (100% identity) | Cco14991BMcrCP | |
| 7705 | 165 aa hypothetical protein | |||