Escherichia coli RM8082 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RM8082 RM systems
Ref: Carter,M.Q. and Pham,A. unpublished
REBASE ref # 33403
| Sequence length: | GenBank #: | |
| Chromosome: | 5,153,748 bp | CP043825 |
| plasmid p1RM8082: | 146,074 bp | CP043829 |
| plasmid p2RM8082: | 97,743 bp | CP043828 |
| plasmid p3RM8082: | 94,550 bp | CP043827 |
REBASE acronym: Eco8082
Org_num: 53884
All begin F1745_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7320 | TrmB family transcriptional regulator | |||
| 7325 | M | M.EcotcmA3ORF4330P (92% identity) | M.Eco8082ORF7325P | |
| 7330 | holin | |||
| 11110 | drug/metabolite exporter YedA | |||
| 11115 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco8082DcmP |
| 11120 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco8082DcmP |
| 11125 | phosphohydrolase | |||
| 18575 | DNA-binding transcriptional regulator Fis | |||
| 18580 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco8082ORF18580P |
| 18585 | DUF2556 domain-containing protein | |||
| 19105 | ribulose-phosphate 3-epimerase | |||
| 19110 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8082DamP |
| 19115 | cell division protein DamX | |||
| 20710 | integrase | |||
| 20715 | R | Eco55B1DptFP (99% identity) | Eco8082DptFP | |
| 20720 | DNA phosphorothioation-dependent restriction | |||
| 20715 | DNA phosphorothioation-dependent restriction | |||
| 20720 | R | Eco55B1DptGP (99% identity) | Eco8082DptGP | |
| 20725 | DNA phosphorothioation-dependent restriction | |||
| 20720 | DNA phosphorothioation-dependent restriction | |||
| 20725 | R | Eco55B1DptHP (99% identity) | Eco8082DptHP | |
| 20730 | 113 aa hypothetical protein | |||
| 20735 | DGQHR domain-containing protein | |||
| 20740 | M | M.Eco55B1DndEP (100% identity) | M.Eco8082DndEP | |
| 20745 | DNA sulfur modification protein DndD | |||
| 20740 | DNA sulfur modification protein DndE | |||
| 20745 | M | M.Eco55B1DndDP (100% identity) | M.Eco8082DndDP | |
| 20750 | DNA phosphorothioation system sulfurtransferase | |||
| 20745 | DNA sulfur modification protein DndD | |||
| 20750 | M | M.SflFF24DndCP (100% identity) | M.Eco8082DndCP | |
| 20755 | DNA sulfur modification protein DndB | |||
| 20750 | DNA phosphorothioation system sulfurtransferase | |||
| 20755 | M | M.SflFF24DndBP (100% identity) | M.Eco8082DndBP | |
| 20760 | transposase | |||
| 23315 | ead/Ea22-like family protein | |||
| 23320 | M | M.EcoR44ORF23150P (100% identity) | M.Eco8082ORF23320P | |
| 23325 | Eae protein | |||
| 23390 | PerC family transcriptional regulator | |||
| 23395 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco8082ORF23395P |
| 23400 | LexA family transcriptional regulator | |||
| 25185 | 332 aa hypothetical protein | |||
| 25190 | R | EcosEC9ORF12570P (99% identity) | Eco8082ORF25190P | |
| 25195 | HNH endonuclease | |||
| plasmid p1RM8082 | ||||
| 28045 | 101 aa hypothetical protein | |||
| 28050 | M | M.SflN92ORF24820P (100% identity) | M.Eco8082ORF28050P | |
| 28055 | 73 aa hypothetical protein | |||
| plasmid p2RM8082 | ||||
| 26935 | 73 aa hypothetical protein | |||
| 26940 | M | M.SspPIBORF23080P (100% identity) | M.Eco8082ORF26940P | |
| 26945 | 102 aa hypothetical protein | |||
| plasmid p3RM8082 | ||||
| 26335 | 73 aa hypothetical protein | |||
| 26340 | M | M.Sen527ORF25750P (99% identity) | M.Eco8082ORF26340P | |
| 26345 | 59 aa hypothetical protein | |||