Prevotella bryantii TC1-1 |
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Putative Prevotella bryantii TC1-1 RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,341,453 bp | CP091801 |
| chromosome 2: | 1,151,685 bp | CP091802 |
REBASE acronym: PbrTC11
Org_num: 54867
All begin L6474_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 11320 | helix-turn-helix transcriptional regulator | |||
| 11325 | M | M.PbrTS15II (99% identity) | GGAYNNNNNTAG | M.PbrTC11II |
| 11330 | 78 aa hypothetical protein | |||
| 11335 | S | S.Cso6382ORF9881P (32% identity) | GGAYNNNNNTAG | S.PbrTC11II |
| 11340 | 81 aa hypothetical protein | |||
| 11345 | AAA family ATPase | |||
| 11350 | 224 aa hypothetical protein | |||
| 11355 | R | PbrB14IIP (99% identity) | GGAYNNNNNTAG | PbrTC11IIP |
| 11360 | beta-galactosidase | |||
| 11925 | phosphohydrolase | |||
| 11930 | M | M.Psp1327II (87% identity) | CCANNNNNNTGA | M.PbrTC11I |
| 11935 | tyrosine-type recombinase/integrase | |||
| 11940 | 127 aa hypothetical protein | |||
| 11945 | 253 aa hypothetical protein | |||
| 11950 | S | S2.PgiLyG2ORF5650P (45% identity) | S1.PbrTC11IP | |
| 11955 | S | S2.Pbi5ORF1160P (44% identity) | CCANNNNNNTGA | S2.PbrTC11I |
| 11960 | 249 aa hypothetical protein | |||
| 11965 | R | Psp1327IIP (68% identity) | CCANNNNNNTGA | PbrTC11IP |
| 11970 | helix-turn-helix domain-containing protein | |||
| 12025 | tyrosine-type recombinase/integrase | |||
| 12030 | S | S3.Pxy3014ORF14560P (46% identity) | S1.PbrTC11ORF12030P | |
| 12035 | S | S2.Bov465ORF2740P (34% identity) | S2.PbrTC11ORF12030P | |
| 12040 | S | S1.AspE39ORF6975P (55% identity) | S3.PbrTC11ORF12030P | |
| 12045 | 84 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5200 | 499 aa hypothetical protein | |||
| 5205 | RM | Pme280ORF4965P (52% identity) | PbrTC11ORF5205P | |
| 5210 | phospholipase D-like domain-containing protein | |||
| 7670 | ATP-binding protein | |||
| 7675 | M | M.PmeOORF7336P (55% identity) | M.PbrTC11ORF7675P | |
| 7680 | DNA cytosine methyltransferase | |||
| 7675 | DNA cytosine methyltransferase | |||
| 7680 | M | M2.Bsa18170ORF1534P (42% identity) | M.PbrTC11ORF7680P | |
| 7685 | 163 aa hypothetical protein | |||
| chromosome 2 | ||||
| 13145 | 708 aa hypothetical protein | |||
| 13150 | M | M1.Pni103ORF10335P (69% identity) | M1.PbrTC11ORF13150P | |
| 13155 | M | M1.EfaWf282ORFEP (48% identity) | M2.PbrTC11ORF13150P | |
| 13160 | 90 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 12510 | DUF4391 domain-containing protein | |||
| 12515 | M | M.Cgr12948ORF766P (62% identity) | M.PbrTC11ORF12515P | |
| 12520 | R | Pbr921ORF12625P (97% identity) | PbrTC11ORF12515P | |
| 12525 | serine protease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5065 | 79 aa hypothetical protein | |||
| 5070 | R | PbrB14McrBP (99% identity) | PbrTC11McrBP | |
| 5075 | R | PbrB14McrCP (99% identity) | PbrTC11McrCP | |
| 5080 | recombinase family protein | |||