Prevotella species E13-17 |
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Putative Prevotella species E13-17 RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
Complete sequence: 3,454,626 bp
GenBank #: CP091787
REBASE acronym: PspE1317
Org_num: 54877
All begin L6472_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3945 | Holliday junction branch migration protein RuvA | |||
| 3950 | R | PspE133IIP (98% identity) | ATCNNNNNGAAT | PspE1317IP |
| 3955 | ATP-binding protein | |||
| 3960 | 204 aa hypothetical protein | |||
| 3965 | S | S.PmeBin558ORFAP (46% identity) | ATCNNNNNGAAT | S2.PspE1317I |
| 3970 | S | S1.PspE133IIP (91% identity) | S1.PspE1317IP | |
| 3975 | M | M.PspE133II (99% identity) | ATCNNNNNGAAT | M.PspE1317I |
| 4295 | DNA polymerase IV | |||
| 4300 | R | SthYORF1315P (63% identity) | PspE1317ORF4320P | |
| 4305 | S | S1.SspC1ORF5240P (51% identity) | S1.PspE1317ORF4320P | |
| 4310 | S | S1.Hpa1710ORF3370P (53% identity) | S2.PspE1317ORF4320P | |
| 4315 | AAA family ATPase | |||
| 4320 | M | M.Pin2838I (73% identity) | M.PspE1317ORF4320P | |
| 4325 | bacteriophage abortive infection AbiH family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11635 | GIY-YIG nuclease family protein | |||
| 11640 | RM | Fsu85ORF699P (35% identity) | PspE1317ORF11640P | |
| 11645 | DNA binding domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7785 | 359 aa hypothetical protein | |||
| 7790 | R | WspSW133ORFBP (44% identity) | GGAGC | PspE1317IIP |
| 7795 | M | M.Bvu10583ORF2572P (37% identity) | GGAGC | M.PspE1317II |
| 7800 | DNA damage-inducible protein D | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5570 | helix-turn-helix domain-containing protein | |||
| 5575 | R | Tde700771McrBP (14% identity) | PspE1317McrBP | |
| 5580 | R | BfrIHMA4McrCP (29% identity) | PspE1317McrCP | |
| 5585 | restriction endonuclease | |||