Prevotella species E13-3 |
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Putative Prevotella species E13-3 RM systems
Ref: Accetto,T. and Johnston,C.D. unpublished
REBASE ref # 33669
Complete sequence: 3,663,999 bp
GenBank #: CP091790
REBASE acronym: PspE133
Org_num: 54878
All begin L6476_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7990 | 160 aa hypothetical protein | |||
| 7995 | R | Pfa489ORF1250P (47% identity) | PspE133ORF8005P | |
| 8000 | S | S.Psc2052ORF3405P (49% identity) | S.PspE133ORF8005P | |
| 8005 | M | M.Pfa489ORF1250P (71% identity) | M.PspE133ORF8005P | |
| 8010 | Fic family protein | |||
| 8335 | 461 aa hypothetical protein | |||
| 8340 | R | PbrTC11IP (62% identity) | PspE133ORF8355P | |
| 8345 | S | S1.PmeBin48ORFCP (34% identity) | S.PspE133ORF8355P | |
| 8350 | 133 aa hypothetical protein | |||
| 8355 | M | M.Psp1327II (84% identity) | M.PspE133ORF8355P | |
| 8360 | 67 aa hypothetical protein | |||
| 10480 | ATP-binding protein | |||
| 10485 | R | Hin8883ORF8820P (33% identity) | PspE133ORF10490P | |
| 10490 | M | M.Bpy6294ORF971P (36% identity) | M.PspE133ORF10490P | |
| 10495 | helix-turn-helix domain-containing protein | |||
| 11250 | 84 aa hypothetical protein | |||
| 11255 | R | PspE225IP (99% identity) | GCANNNNNNNNTGCG | PspE133IIIP |
| 11260 | 212 aa hypothetical protein | |||
| 11265 | S | S.PspE225I (100% identity) | GCANNNNNNNNTGCG | S.PspE133III |
| 11270 | M | M.PspE1aII (100% identity) | GCANNNNNNNNTGCG | M.PspE133III |
| 11275 | DNA-binding protein | |||
| 12255 | 69 aa hypothetical protein | |||
| 12260 | R | PspE1317IP (98% identity) | GATNNNNNNNNTTRG | PspE133IIP |
| 12265 | virulence RhuM family protein | |||
| 12270 | 435 aa hypothetical protein | |||
| 12275 | S | S.MmaDAL1ORF2860P (35% identity) | GATNNNNNNNNTTRG | S2.PspE133II |
| 12280 | S | S1.PspE1317IP (91% identity) | S1.PspE133IIP | |
| 12285 | M | M.PspE1317I (99% identity) | GATNNNNNNNNTTRG | M.PspE133II |
| 12290 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7005 | phospholipase D-like domain-containing protein | |||
| 7010 | RM | PspE1aORF6835P (100% identity) | PspE133ORF7010P | |
| 7015 | 157 aa hypothetical protein | |||
| 7395 | DpnD/PcfM family protein | |||
| 7400 | M | M.PspE1514ORF7205P (99% identity) | M.PspE133ORF7400P | |
| 7405 | type II restriction endonuclease | |||
| 7400 | DNA adenine methylase | |||
| 7405 | R | PspE1514ORF7195P (97% identity) | PspE133ORF7410P | |
| 7410 | M | M2.PspE225ORF6905P (98% identity) | M.PspE133ORF7410P | |
| 7415 | 100 aa hypothetical protein | |||
| 11525 | 115 aa hypothetical protein | |||
| 11530 | RM | CmaORF1194P (57% identity) | PspE133ORF11530P | |
| 11535 | 183 aa hypothetical protein | |||
| 14695 | 265 aa hypothetical protein | |||
| 14700 | R | PspE1aORF14665P (100% identity) | PspE133ORF14705P | |
| 14705 | M | M.PspE1aORF14665P (99% identity) | M.PspE133ORF14705P | |
| 5 | DUF4254 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6135 | DNA binding domain-containing protein | |||
| 6140 | M | M.ScoH2489ORFBP (56% identity) | M.PspE133ORF6140P | |
| 6145 | R | Ece6ORF1866P (31% identity) | PspE133ORF6140P | |
| 6150 | 452 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10085 | 8-oxo-dGTP diphosphatase MutT | |||
| 10090 | R | PspE93ORF8405P (93% identity) | PspE133ORF10090P | |
| 10095 | RecQ family ATP-dependent DNA helicase | |||