Actinobacillus pleuropneumoniae serovar 4 M62 |
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Putative Actinobacillus pleuropneumoniae serovar 4 M62 RM systems
Ref: Dona,V. and Perreten,V. unpublished
REBASE ref # 26522
Complete sequence: 2,335,268 bp
GenBank #: CP031873
REBASE acronym: AplM62
Org_num: 53322
All begin D1097_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1485 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 1490 | M | M.Apl4ORF3140P (100% identity) | AACNNNNNNRTAC | M.AplM62ORF1490P |
| 1495 | cell filamentation protein Fic | |||
| 1500 | CAAX protease | |||
| 1505 | S | S.Apl4ORF3140P (100% identity) | AACNNNNNNRTAC | S.AplM62ORF1490P |
| 1510 | anticodon nuclease | |||
| 1515 | R | Apl4ORF3200P (100% identity) | AACNNNNNNRTAC | AplM62ORF1490P |
| 1520 | ABC transporter ATP-binding protein | |||
| 7575 | phosphatidylserine decarboxylase | |||
| 7580 | R | Apl4ORF14420P (100% identity) | AplM62ORF7585P | |
| 7585 | M | M.Apl4ORF14420P (100% identity) | M.AplM62ORF7585P | |
| 7590 | hydroxyacid dehydrogenase | |||
| 7595 | S | S1.Apl11384II (100% identity) | CCANNNNNNNNRTTG | S1.AplM62ORF7585P |
| 7600 | integrase | |||
| 7605 | S | S2.Apl4ORF14420P (100% identity) | S2.AplM62ORF7585P | |
| 7610 | bifunctional glutamate--cysteine ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 985 | sodium-dependent transporter | |||
| 990 | M | M.AplS4074ORF995P (100% identity) | GATC | M.AplM62ORF990P |
| 995 | 3-dehydroquinate synthase | |||
| 2995 | replication protein | |||
| 3000 | M | M.Apl4ORF20860P (100% identity) | GATC | M.AplM62ORF3000P |
| 3005 | integrase | |||
| 5085 | IS1595 family transposase | |||
| 5090 | R | Apl8329ORF6685P (100% identity) | GGATG | AplM62ORF5095P |
| 5095 | M | M2.Apl8329ORF6685P (100% identity) | GGATG | M1.AplM62ORF5095P |
| 5100 | M | M1.Apl8329ORF6685P (100% identity) | GGATG | M2.AplM62ORF5095P |
| 5105 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3070 | lytic transglycosylase | |||
| 3075 | M | M.Apl11384ORF626P (100% identity) | M.AplM62ORF3075P | |
| 3080 | R | Apl4ORF8290P (100% identity) | AplM62ORF3075P | |
| 3085 | 30S ribosomal protein S12 methylthiotransferase | |||
| 3870 | DUF4391 domain-containing protein | |||
| 3875 | M | M.Apl4ORF6630P (100% identity) | M.AplM62ORF3875P | |
| 3880 | R | AplP1421ORF3165P (99% identity) | AplM62ORF3875P | |
| 3885 | Xaa-Pro aminopeptidase | |||
| 4360 | terminase small subunit | |||
| 4365 | M | M.Apl11384ORF892P (93% identity) | M.AplM62ORF4365P | |
| 4370 | methyltransferase | |||