Actinobacillus pleuropneumoniae 8329 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Actinobacillus pleuropneumoniae 8329 RM systems
Ref: Dona,V. and Perreten,V. unpublished
REBASE ref # 26522
Complete sequence: 2,252,295 bp
GenBank #: CP031862
REBASE acronym: Apl8329
Org_num: 53310
All begin D1105_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1495 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| 1500 | M | M.Apl12ORF3220P (100% identity) | M.Apl8329ORF1500P | |
| 1505 | cell filamentation protein Fic | |||
| 1510 | ATPase | |||
| 1515 | CAAX protease | |||
| 1520 | S | S.AplS1536ORF1515P (99% identity) | S.Apl8329ORF1500P | |
| 1525 | anticodon nuclease | |||
| 1530 | DUF3791 domain-containing protein | |||
| 1535 | DUF3990 domain-containing protein | |||
| 1540 | DUF3791 domain-containing protein | |||
| 1545 | R | Apl12ORF3320P (100% identity) | Apl8329ORF1500P | |
| 1550 | ABC transporter ATP-binding protein | |||
| 7280 | phosphatidylserine decarboxylase | |||
| 7285 | R | Apl12ORF20670P (100% identity) | Apl8329ORF7290P | |
| 7290 | M | M.AplS4074ORF8040P (100% identity) | M.Apl8329ORF7290P | |
| 7295 | hydroxyacid dehydrogenase | |||
| 7300 | S | S1.Apl555ORF7185P (92% identity) | S1.Apl8329ORF7290P | |
| 7305 | integrase | |||
| 7310 | S | S2.Apl555ORF7185P (100% identity) | S2.Apl8329ORF7290P | |
| 7315 | bifunctional glutamate--cysteine ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6680 | XRE family transcriptional regulator | |||
| 6685 | M | M2.AplM62ORF5095P (100% identity) | GGATG | M1.Apl8329ORF6685P |
| 6690 | M | M1.AplM62ORF5095P (100% identity) | GGATG | M2.Apl8329ORF6685P |
| 6695 | R | AplM62ORF5095P (100% identity) | GGATG | Apl8329ORF6685P |
| 6700 | IS1595 family transposase | |||
| 9000 | DNA-directed RNA polymerase subunit beta | |||
| 9005 | M | M.Apl8514aORF9720P (100% identity) | GTYRAC | M.Apl8329ORF9005P |
| 9010 | R | AplS1536ORF9170P (100% identity) | GTYRAC | Apl8329ORF9005P |
| 9015 | AbrB/MazE/SpoVT family DNA-binding | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4120 | 30S ribosomal protein S12 methylthiotransferase | |||
| 4125 | R | Apl13039ORF4390P (100% identity) | Apl8329ORF4130P | |
| 4130 | M | M.Apl12ORF8600P (99% identity) | M.Apl8329ORF4130P | |
| 4135 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | sodium-dependent transporter | |||
| 1005 | M | M.AplWF83ORF1005P (100% identity) | GATC | M.Apl8329ORF1005P |
| 1010 | 3-dehydroquinate synthase | |||