Ref: Dona,V. and Perreten,V. unpublished

REBASE ref # 26522

Sequence length:GenBank #:
Chromosome: 2,364,304 bp CP069795
Chromosome: 2,361,730 bp CP031858

REBASE acronym: Apl8514

Org_num: 53311

 

All begin D1109_, JS559_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
1490 DNA topoisomerase (ATP-hydrolyzing) subunit A
1495 M M.Apl8514ORF9945P (100% identity) GAAGNNNNNNNTCC M.Apl8514aORF1495P
1500 Bro-N domain-containing protein
1505 S S.Apl8514ORF9945P (100% identity) GAAGNNNNNNNTCC S.Apl8514aORF1495P
1510 anticodon nuclease
1515 R Apl8514ORF9945P (100% identity) GAAGNNNNNNNTCC Apl8514aORF1495P
1520 ABC transporter ATP-binding protein
 
6755 LLM class flavin-dependent oxidoreductase
6760 S S.AplL20ORF1194P (100% identity) S.Apl8514aORF6765P
6765 M M.AplL20ORF1194P (100% identity) M.Apl8514aORF6765P
6770 DNA binding domain-containing protein
6775 R AplL20ORF1194P (100% identity) Apl8514aORF6765P
6780 NAD(P)-dependent oxidoreductase
 
Chromosome
 
3805 LLM class flavin-dependent oxidoreductase
3810 S S.AplL20ORF1194P (100% identity) S.Apl8514ORF3815P
3815 M M.AplL20ORF1194P (100% identity) M.Apl8514ORF3815P
3820 transcriptional regulator
3825 R AplL20ORF1194P (100% identity) Apl8514ORF3815P
3830 NAD(P)-dependent oxidoreductase
 
9940 DNA topoisomerase (ATP-hydrolyzing) subunit A
9945 M M.Apl8514aORF1495P (100% identity) GAAGNNNNNNNTCC M.Apl8514ORF9945P
9950 ATPase
9955 S S.Apl8514aORF1495P (100% identity) GAAGNNNNNNNTCC S.Apl8514ORF9945P
9960 anticodon nuclease
9965 R Apl8514aORF1495P (100% identity) GAAGNNNNNNNTCC Apl8514ORF9945P
9970 ABC transporter ATP-binding protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
3090 Com family DNA-binding transcriptional
3095 M M.Apl8514aORF3900P (100% identity) M.Apl8514aORF3095P
3100 ATP-dependent RNA helicase RhlB
 
3895 hemerythrin domain-containing protein
3900 M M.Apl8514aORF3095P (100% identity) M.Apl8514aORF3900P
3905 Com family DNA-binding transcriptional
 
4480 DUF968 domain-containing protein
4485 M M.Apl8514ORF1510P (100% identity) M.Apl8514aORF4485P
4490 conserved phage C-terminal domain-containing
 
4565 DNA methyltransferase
4570 M M.Apl9ORF5330P (100% identity) M.Apl8514aORF4570P
4575 73 aa hypothetical protein
 
6790 MarC family protein
6795 V V.AplL20ORF1202P (100% identity) V.Apl8514aORF6805P
6800 R AplK17ORF1300P (100% identity) CCGG Apl8514aORF6805P
6805 M M.AplL20ORF1202P (97% identity) CCGG M.Apl8514aORF6805P
6810 DUF479 domain-containing protein
 
9715 DNA-directed RNA polymerase subunit beta
9720 M M.Apl8514ORF6770P (100% identity) GTYRAC M.Apl8514aORF9720P
9725 R Apl8514ORF6770P (100% identity) GTYRAC Apl8514aORF9720P
9730 AbrB/MazE/SpoVT family DNA-binding
 
Chromosome
 
100 Com family DNA-binding transcriptional
105 M M.Apl8514aORF3900P (99% identity) M.Apl8514ORF105P
110 ATP-dependent RNA helicase RhlB
 
925 hemerythrin domain-containing protein
930 M M.Apl8514aORF3900P (100% identity) M.Apl8514ORF930P
935 Com family DNA-binding transcriptional
 
1505 DUF968 domain-containing protein
1510 M M.Apl8514aORF4485P (100% identity) M.Apl8514ORF1510P
1515 190 aa hypothetical protein
 
1595 DNA methyltransferase
1600 M M.Apl9ORF5330P (100% identity) M.Apl8514ORF1600P
1605 73 aa hypothetical protein
 
3840 MarC family protein
3845 V V.AplL20ORF1202P (100% identity) V.Apl8514ORF3855P
3850 R AplK17ORF1300P (100% identity) CCGG Apl8514ORF3855P
3855 M M.AplL20ORF1202P (97% identity) CCGG M.Apl8514ORF3855P
3860 DUF479 domain-containing protein
 
6765 DNA-directed RNA polymerase subunit beta
6770 M M.Apl8514aORF9720P (100% identity) GTYRAC M.Apl8514ORF6770P
6775 R Apl8514aORF9720P (100% identity) GTYRAC Apl8514ORF6770P
6780 AbrB/MazE/SpoVT family DNA-binding
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
3800 DEAD/DEAH box helicase family protein
3805 R Apl8514ORF835P (100% identity) Apl8514aORF3810P
3810 M M.Apl8514ORF835P (100% identity) M.Apl8514aORF3810P
3815 MurR/RpiR family transcriptional regulator
 
Chromosome
 
10820 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
10825 M M.AplP1421ORF3995P (100% identity) M.Apl8514ORF10825P
10830 R Apl8514aORF2360P (100% identity) Apl8514ORF10825P
10835 30S ribosomal protein S12 methylthiotransferase
Orphan M
ORF Gene Most similar Specificity Name
 
Chromosome
 
1000 sodium-dependent transporter
1005 M M.AplWF83ORF1005P (100% identity) GATC M.Apl8514aORF1005P
1010 3-dehydroquinate synthase
 
Chromosome
 
9450 sodium-dependent transporter
9455 M M.AplWF83ORF1005P (100% identity) GATC M.Apl8514ORF9455P
9460 3-dehydroquinate synthase
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