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Putative Actinobacillus pleuropneumoniae A-85/14 RM systems
Ref: Dona,V. and Perreten,V. unpublished
REBASE ref # 26522
Sequence length: | GenBank #: | |
Chromosome: | 2,364,304 bp | CP069795 |
Chromosome: | 2,361,730 bp | CP031858 |
REBASE acronym: Apl8514
Org_num: 53311
All begin D1109_, JS559_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1490 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
1495 | M | M.Apl8514ORF9945P (100% identity) | GAAGNNNNNNNTCC | M.Apl8514aORF1495P |
1500 | Bro-N domain-containing protein | |||
1505 | S | S.Apl8514ORF9945P (100% identity) | GAAGNNNNNNNTCC | S.Apl8514aORF1495P |
1510 | anticodon nuclease | |||
1515 | R | Apl8514ORF9945P (100% identity) | GAAGNNNNNNNTCC | Apl8514aORF1495P |
1520 | ABC transporter ATP-binding protein | |||
6755 | LLM class flavin-dependent oxidoreductase | |||
6760 | S | S.AplL20ORF1194P (100% identity) | S.Apl8514aORF6765P | |
6765 | M | M.AplL20ORF1194P (100% identity) | M.Apl8514aORF6765P | |
6770 | DNA binding domain-containing protein | |||
6775 | R | AplL20ORF1194P (100% identity) | Apl8514aORF6765P | |
6780 | NAD(P)-dependent oxidoreductase | |||
Chromosome | ||||
3805 | LLM class flavin-dependent oxidoreductase | |||
3810 | S | S.AplL20ORF1194P (100% identity) | S.Apl8514ORF3815P | |
3815 | M | M.AplL20ORF1194P (100% identity) | M.Apl8514ORF3815P | |
3820 | transcriptional regulator | |||
3825 | R | AplL20ORF1194P (100% identity) | Apl8514ORF3815P | |
3830 | NAD(P)-dependent oxidoreductase | |||
9940 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
9945 | M | M.Apl8514aORF1495P (100% identity) | GAAGNNNNNNNTCC | M.Apl8514ORF9945P |
9950 | ATPase | |||
9955 | S | S.Apl8514aORF1495P (100% identity) | GAAGNNNNNNNTCC | S.Apl8514ORF9945P |
9960 | anticodon nuclease | |||
9965 | R | Apl8514aORF1495P (100% identity) | GAAGNNNNNNNTCC | Apl8514ORF9945P |
9970 | ABC transporter ATP-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3090 | Com family DNA-binding transcriptional | |||
3095 | M | M.Apl8514aORF3900P (100% identity) | M.Apl8514aORF3095P | |
3100 | ATP-dependent RNA helicase RhlB | |||
3895 | hemerythrin domain-containing protein | |||
3900 | M | M.Apl8514aORF3095P (100% identity) | M.Apl8514aORF3900P | |
3905 | Com family DNA-binding transcriptional | |||
4480 | DUF968 domain-containing protein | |||
4485 | M | M.Apl8514ORF1510P (100% identity) | M.Apl8514aORF4485P | |
4490 | conserved phage C-terminal domain-containing | |||
4565 | DNA methyltransferase | |||
4570 | M | M.Apl9ORF5330P (100% identity) | M.Apl8514aORF4570P | |
4575 | 73 aa hypothetical protein | |||
6790 | MarC family protein | |||
6795 | V | V.AplL20ORF1202P (100% identity) | V.Apl8514aORF6805P | |
6800 | R | AplK17ORF1300P (100% identity) | CCGG | Apl8514aORF6805P |
6805 | M | M.AplL20ORF1202P (97% identity) | CCGG | M.Apl8514aORF6805P |
6810 | DUF479 domain-containing protein | |||
9715 | DNA-directed RNA polymerase subunit beta | |||
9720 | M | M.Apl8514ORF6770P (100% identity) | GTYRAC | M.Apl8514aORF9720P |
9725 | R | Apl8514ORF6770P (100% identity) | GTYRAC | Apl8514aORF9720P |
9730 | AbrB/MazE/SpoVT family DNA-binding | |||
Chromosome | ||||
100 | Com family DNA-binding transcriptional | |||
105 | M | M.Apl8514aORF3900P (99% identity) | M.Apl8514ORF105P | |
110 | ATP-dependent RNA helicase RhlB | |||
925 | hemerythrin domain-containing protein | |||
930 | M | M.Apl8514aORF3900P (100% identity) | M.Apl8514ORF930P | |
935 | Com family DNA-binding transcriptional | |||
1505 | DUF968 domain-containing protein | |||
1510 | M | M.Apl8514aORF4485P (100% identity) | M.Apl8514ORF1510P | |
1515 | 190 aa hypothetical protein | |||
1595 | DNA methyltransferase | |||
1600 | M | M.Apl9ORF5330P (100% identity) | M.Apl8514ORF1600P | |
1605 | 73 aa hypothetical protein | |||
3840 | MarC family protein | |||
3845 | V | V.AplL20ORF1202P (100% identity) | V.Apl8514ORF3855P | |
3850 | R | AplK17ORF1300P (100% identity) | CCGG | Apl8514ORF3855P |
3855 | M | M.AplL20ORF1202P (97% identity) | CCGG | M.Apl8514ORF3855P |
3860 | DUF479 domain-containing protein | |||
6765 | DNA-directed RNA polymerase subunit beta | |||
6770 | M | M.Apl8514aORF9720P (100% identity) | GTYRAC | M.Apl8514ORF6770P |
6775 | R | Apl8514aORF9720P (100% identity) | GTYRAC | Apl8514ORF6770P |
6780 | AbrB/MazE/SpoVT family DNA-binding | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3800 | DEAD/DEAH box helicase family protein | |||
3805 | R | Apl8514ORF835P (100% identity) | Apl8514aORF3810P | |
3810 | M | M.Apl8514ORF835P (100% identity) | M.Apl8514aORF3810P | |
3815 | MurR/RpiR family transcriptional regulator | |||
Chromosome | ||||
10820 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic | |||
10825 | M | M.AplP1421ORF3995P (100% identity) | M.Apl8514ORF10825P | |
10830 | R | Apl8514aORF2360P (100% identity) | Apl8514ORF10825P | |
10835 | 30S ribosomal protein S12 methylthiotransferase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1000 | sodium-dependent transporter | |||
1005 | M | M.AplWF83ORF1005P (100% identity) | GATC | M.Apl8514aORF1005P |
1010 | 3-dehydroquinate synthase | |||
Chromosome | ||||
9450 | sodium-dependent transporter | |||
9455 | M | M.AplWF83ORF1005P (100% identity) | GATC | M.Apl8514ORF9455P |
9460 | 3-dehydroquinate synthase |