Actinobacillus pleuropneumoniae K17 |
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Putative Actinobacillus pleuropneumoniae K17 RM systems
Ref: Dona,V. and Perreten,V. unpublished
REBASE ref # 26522
Complete sequence: 2,284,762 bp
GenBank #: CP069797
REBASE acronym: AplK17
Org_num: 53313
All begin D1098_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1325 | NAD(P)-dependent oxidoreductase | |||
| 1330 | R | AplL20ORF1194P (100% identity) | AplK17ORF1340P | |
| 1335 | DNA binding domain-containing protein | |||
| 1340 | M | M.AplL20ORF1194P (100% identity) | M.AplK17ORF1340P | |
| 1345 | S | S.AplL20ORF1194P (100% identity) | S.AplK17ORF1340P | |
| 1350 | LLM class flavin-dependent oxidoreductase | |||
| 4230 | ribosome maturation factor RimP | |||
| 4240 | R | AplL20ORF633P (99% identity) | AplK17ORF4255P | |
| 4245 | abortive infection family protein | |||
| 4250 | S | S.AplApp6ORF769P (100% identity) | S.AplK17ORF4255P | |
| 4255 | M | M.AplL20ORF633P (100% identity) | M.AplK17ORF4255P | |
| 4260 | bifunctional tetrahydrofolate | |||
| 6130 | ABC transporter ATP-binding protein | |||
| 6135 | R | AplApp6ORF390P (100% identity) | GAAGNNNNNNNTCC | AplK17ORF6155P |
| 6140 | anticodon nuclease | |||
| 6145 | S | S.AplL20ORF287P (100% identity) | GAAGNNNNNNNTCC | S.AplK17ORF6155P |
| 6150 | Bro-N domain-containing protein | |||
| 6155 | M | M.AplL20ORF287P (100% identity) | GAAGNNNNNNNTCC | M.AplK17ORF6155P |
| 6160 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1295 | DUF479 domain-containing protein | |||
| 1300 | M | M.AplL20ORF1202P (97% identity) | CCGG | M.AplK17ORF1300P |
| 1305 | R | AplAPP5ORF1935P (100% identity) | CCGG | AplK17ORF1300P |
| 1310 | V | V.AplL20ORF1202P (100% identity) | V.AplK17ORF1300P | |
| 1315 | MarC family protein | |||
| 4980 | DUF1367 family protein | |||
| 4985 | M | M.Apl1ORFGP (100% identity) | GATC | M.AplK17ORF4985P |
| 4990 | AAA family ATPase | |||
| 5095 | DUF551 domain-containing protein | |||
| 5100 | M | M.Apl1ORFFP (100% identity) | M.AplK17ORF5100P | |
| 5105 | tRNA delta(2)-isopentenylpyrophosphate | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3290 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic | |||
| 3295 | M | M.AplL20ORF812P (100% identity) | M.AplK17ORF3295P | |
| 3300 | R | AplL20ORF812P (100% identity) | AplK17ORF3295P | |
| 3305 | 30S ribosomal protein S12 methylthiotransferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6640 | 3-dehydroquinate synthase | |||
| 6645 | M | M.AplWF83ORF1005P (100% identity) | GATC | M.AplK17ORF6645P |
| 6650 | sodium-dependent transporter | |||