|
Putative Vibrio parahaemolyticus VP17 RM systems
Ref: Fu,S. unpublished
REBASE ref # 33935
Sequence length: | GenBank #: | |
chromosome I: | 3,567,562 bp | CP068633 |
chromosome II: | 1,863,898 bp | CP068634 |
plasmid pVP17-1: | 70,247 bp | CP068635 |
REBASE acronym: VpaVP17
Org_num: 56013
All begin JHT19_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1930 | 331 aa hypothetical protein | |||
1935 | S | S.Vpa1937ORFEP (100% identity) | S.VpaVP17ORF1940P | |
1940 | M | M.Vpa1937ORFEP (100% identity) | M.VpaVP17ORF1940P | |
1945 | 132 aa hypothetical protein | |||
1950 | 49 aa hypothetical protein | |||
1955 | elongation factor Ts | |||
1960 | site-specific DNA-methyltransferase | |||
1965 | Abi family protein | |||
1970 | R | Vpa1937ORFEP (98% identity) | VpaVP17ORF1940P | |
1975 | MarR family transcriptional regulator | |||
8975 | 145 aa hypothetical protein | |||
8980 | R | Vpa1937ORFDP (100% identity) | VpaVP17ORF9005P | |
8985 | S | S2.ValSP1ORF17270P (98% identity) | S2.VpaVP17ORF9005P | |
8990 | 70 aa hypothetical protein | |||
8995 | FRG domain-containing protein | |||
9000 | S | S2.Vpa1937ORFDP (100% identity) | S1.VpaVP17ORF9005P | |
9005 | M | M.Vpa1937ORFDP (100% identity) | M.VpaVP17ORF9005P | |
9010 | 263 aa hypothetical protein | |||
14045 | nicotinamide-nucleotide amidase | |||
14050 | M | M.VpaG855ORF1285P (100% identity) | M.VpaVP17ORF14050P | |
14055 | AAA family ATPase | |||
14060 | S | S.VpaG855ORF1285P (51% identity) | S1.VpaVP17ORF14050P | |
14065 | S | S.Vpa1937ORFCP (39% identity) | S2.VpaVP17ORF14050P | |
14070 | IS3 family transposase | |||
14075 | R | Vpa1937ORFCP (100% identity) | VpaVP17ORF14050P | |
14080 | DUF2787 domain-containing protein | |||
chromosome II | ||||
22830 | 511 aa hypothetical protein | |||
22835 | S | S.VpaS2ORFFP (15% identity) | S2.VpaVP17ORF22845P | |
22840 | S | S.Vpa1937ORFFP (100% identity) | S1.VpaVP17ORF22845P | |
22845 | M | M.Vpa1937ORFFP (98% identity) | M.VpaVP17ORF22845P | |
22850 | R | Vpa0051ORF23315P (100% identity) | VpaVP17ORF22845P | |
22855 | sigma-54-dependent Fis family transcriptional | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1955 | elongation factor Ts | |||
1960 | M | M.Vpa0051ORF2180P (99% identity) | M.VpaVP17ORF1960P | |
1965 | Abi family protein | |||
10795 | 90 aa hypothetical protein | |||
10800 | M | M.VpaS2ORFEP (91% identity) | M.VpaVP17ORF10800P | |
10805 | 102 aa hypothetical protein | |||
13370 | BREX-1 system phosphatase PglZ type A | |||
13375 | RM | Vpa1937ORFBP (100% identity) | VpaVP17ORF13375P | |
13380 | DUF262 domain-containing protein | |||
plasmid pVP17-1 | ||||
25315 | IS5 family transposase | |||
25320 | M | M.VpaTW01ORF25925P (100% identity) | M.VpaVP17ORF25320P | |
25325 | 496 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
1980 | AlpA family phage regulatory protein | |||
1985 | R | Vpa1937MrrP (100% identity) | VpaVP17MrrP | |
1990 | preprotein translocase subunit SecB |