Helicobacter pylori AL03 |
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Putative Helicobacter pylori AL03 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,652,551 bp
GenBank #: CP058288
REBASE acronym: HpyAL03
Org_num: 54086
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyHK840ORFLP (97% identity) | CTANNNNNNNTGC | S.HpyAL03ORFGP |
| ??? | R | HpyHK711ORFBP (96% identity) | HpyAL03ORFWP | |
| ??? | S | S.HpyCHN2ORF4160P (55% identity) | S.HpyAL03ORFWP | |
| ??? | M | M.HpyCA20V (59% identity) | M.HpyAL03ORFWBP | |
| ??? | M | M.HpyCA7ORF5505P (39% identity) | M.HpyAL03ORFWAP | |
| ??? | R | HpyUM038ORF2100P (82% identity) | CCANNNNNNTAA | HpyAL03ORFXP |
| ??? | M | M.HpyAL05ORFFP (99% identity) | CCANNNNNNTAA | M.HpyAL03ORFXP |
| ??? | S | S.HpyK014ORF4440P (98% identity) | CCANNNNNNTAA | S.HpyAL03ORFXP |
| ??? | M | M.Hpy66ORF85P (48% identity) | M1.HpyAL03ORFDP | |
| ??? | M | S.HpyKA1ORF7040P (43% identity) | M2.HpyAL03ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyC116VII (99% identity) | CCTC | M1.HpyAL03ORFKP |
| ??? | M | M2.HpyU003VP (100% identity) | CCTC | M2.HpyAL03ORFKP |
| ??? | R | Hpy86ORF6885P (88% identity) | CCTC | HpyAL03ORFKP |
| ??? | R | HpyAs009ORF465P (93% identity) | GATC | HpyAL03ORFVP |
| ??? | M | M.Hpy6ORF13650P (98% identity) | GATC | M.HpyAL03ORFVP |
| ??? | M | M.HpySP413ORF6670P (97% identity) | M1.HpyAL03ORFA1P | |
| ??? | M | M2.HpySG05ORF940P (98% identity) | M2.HpyAL03ORFA1P | |
| ??? | R | R1.HpyHK840ORFG1P (49% identity) | HpyAL03ORFA1P | |
| ??? | M | M.HpyMA15II (98% identity) | TCGA | M.HpyAL03ORFJP |
| ??? | M | M.Hpyfe10ORF7530P (96% identity) | TGCA | M.HpyAL03ORFUP |
| ??? | R | Hpyfe7ORF7395P (99% identity) | TGCA | HpyAL03ORFUP |
| ??? | M | M.HpyP107ORF6850P (98% identity) | M.HpyAL03ORFRP | |
| ??? | R | HpyUM065ORF7835P (98% identity) | HpyAL03ORFRP | |
| ??? | M | M2.Hpyfe78ORF7125P (95% identity) | GAAGA | M1.HpyAL03ORFIP |
| ??? | M | M1.HpyLIM7V (99% identity) | GAAGA | M2.HpyAL03ORFIP |
| ??? | R | HpyK027VP (95% identity) | GAAGA | HpyAL03ORFIP |
| ??? | M | M.HpyUM114ORF6535P (99% identity) | M.HpyAL03ORFD1P | |
| ??? | R | HpyUM023ORF560P (95% identity) | HpyAL03ORFD1P | |
| ??? | M | M.HpyP89ORFLP (96% identity) | CATG | M.HpyAL03ORFMP |
| ??? | M | M.HpyAL02ORFQP (98% identity) | M.HpyAL03ORFQP | |
| ??? | R | HpyK114XIVP (100% identity) | TCNNGA | HpyAL03ORFOP |
| ??? | M | M.HpyU203XII (99% identity) | TCNNGA | M.HpyAL03ORFOP |
| ??? | M | M.HpyCA7VI (93% identity) | GTNNAC | M.HpyAL03ORFLP |
| ??? | R | HpyHK840ORFRP (96% identity) | GTNNAC | HpyAL03ORFLP |
| ??? | M | M.HpyM5CORFYP (98% identity) | GTAC | M.HpyAL03ORFNP |
| ??? | R | HpyAL02ORFNP (41% identity) | GTAC | HpyAL03ORFNP |
| ??? | RM | HpyME28ORF3255P (90% identity) | HpyAL03ORFYP | |
| ??? | M | M.HpyV006ORF2895P (48% identity) | M.HpyAL03ORFPAP | |
| ??? | M | M.HpyKA2ORF2515P (50% identity) | M.HpyAL03ORFPBP | |
| ??? | R | HpyOK304ORFWP (98% identity) | HpyAL03ORFPP | |
| ??? | R | HpyJ013ORF2435P (99% identity) | ACNGT | HpyAL03ORFTP |
| ??? | M | M.Hpy83ORF521P (96% identity) | M.HpyAL03ORFTP | |
| ??? | M | M.HpyAL04ORFKP (98% identity) | ATTAAT | M.HpyAL03ORFFP |
| ??? | M | M.Hpyoh1ORF4535P (99% identity) | GCNGC | M.HpyAL03ORFSP |
| ??? | RM | HpyBR12ORF7095P (72% identity) | HpyAL03ORFBP | |
| ??? | M | M.HpyAL03ORFB1P (100% identity) | M1.HpyAL03ORFB1P | |
| ??? | M | M2.Hpyfe56ORF355P (98% identity) | M2.HpyAL03ORFB1P | |
| ??? | R | HpyNCI23ORFWP (98% identity) | HpyAL03ORFB1P | |
| ??? | M | M.HpyPE108ORF7515P (98% identity) | M.HpyAL03ORFHP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyUM085ORF4335P (91% identity) | HpyAL03ORFZP | |
| ??? | M | M.HpyPF16ORF6530P (95% identity) | M.HpyAL03ORFZP | |
| ??? | R | HpyCA7ORF2325P (93% identity) | HpyAL03ORFCP | |
| ??? | M | M.Hpy2ALORF525P (93% identity) | M.HpyAL03ORFCP | |
| ??? | R | HpyCA1ORF4360P (96% identity) | HpyAL03ORFEP | |
| ??? | M | M.HpyAL04ORFFP (97% identity) | M.HpyAL03ORFEP | |