Helicobacter pylori AL05 |
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Putative Helicobacter pylori AL05 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,621,023 bp
GenBank #: CP058286
REBASE acronym: HpyAL05
Org_num: 54088
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyKG10ORF2200P (98% identity) | CAGNNNNNTTT | S.HpyAL05ORFFP |
| ??? | M | M.HpyAL03ORFXP (99% identity) | CAGNNNNNTTT | M.HpyAL05ORFFP |
| ??? | R | HpyCA16ORF4960P (75% identity) | CAGNNNNNTTT | HpyAL05ORFFBP |
| ??? | R | HpyAL02ORFDP (19% identity) | CAGNNNNNTTT | HpyAL05ORFFAP |
| ??? | R | HpyAL04ORFEP (98% identity) | TCTANNNNNNNTTTA | HpyAL05ORFCP |
| ??? | M | M.HpyAL02ORFFP (99% identity) | TCTANNNNNNNTTTA | M.HpyAL05ORFCP |
| ??? | S | S.Hpy17874ORF4174P (97% identity) | TCTANNNNNNNTTTA | S.HpyAL05ORFCP |
| ??? | S | S.HpyC017XV (51% identity) | S1.HpyAL05ORFWP | |
| ??? | S | S.Hpy117ORF7375P (50% identity) | S2.HpyAL05ORFWP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyJ022II (99% identity) | GATC | M.HpyAL05ORFRP |
| ??? | M | M.HpyHK721ORFMP (99% identity) | TCGA | M.HpyAL05ORFIP |
| ??? | R | HpyIR2IVP (67% identity) | CCGG | HpyAL05ORFSP |
| ??? | M | M.HpyCA8IV (99% identity) | CCGG | M.HpyAL05ORFSP |
| ??? | M | M.HpySP804ORF1705P (99% identity) | GCNGC | M.HpyAL05ORFPP |
| ??? | M | M.HpyK029II (98% identity) | ATTAAT | M.HpyAL05ORFGP |
| ??? | M | M.Hpy120ORF2335P (93% identity) | M.HpyAL05ORFLP | |
| ??? | R | Hpyfe110ORF5235P (98% identity) | ACGT | HpyAL05ORFLP |
| ??? | RM | HpyK111ORF3435P (86% identity) | HpyAL05ORFDP | |
| ??? | R | Hpyfe23ORF2875P (98% identity) | GTNNAC | HpyAL05ORFJP |
| ??? | M | M.HpyOK305ORFMP (99% identity) | GTNNAC | M.HpyAL05ORFJP |
| ??? | M | M.HpyPU006XII (99% identity) | TCNNGA | M.HpyAL05ORFMP |
| ??? | R | Hpyfe85ORF2060P (100% identity) | TCNNGA | HpyAL05ORFMP |
| ??? | M | M.HpyAL02ORFQP (99% identity) | GCGC | M.HpyAL05ORFNP |
| ??? | M | M.Hpy199ORFUP (94% identity) | M.HpyAL05ORFKP | |
| ??? | R | R2.Hpyfe62ORF6835P (99% identity) | HpyAL05ORFVP | |
| ??? | M | M.HpyUM023ORF560P (97% identity) | M.HpyAL05ORFVP | |
| ??? | M | HpyC66ORFOP (41% identity) | M.HpyAL05ORFUP | |
| ??? | R | HpyNCI32IVP (98% identity) | TGCA | HpyAL05ORFQP |
| ??? | M | M.HpyCA7VII (97% identity) | TGCA | M.HpyAL05ORFQP |
| ??? | RM | HpyC66ORFUP (88% identity) | HpyAL05ORFBP | |
| ??? | R | HpyHK711ORFJP (96% identity) | CCATC | HpyAL05ORFHP |
| ??? | M | M2.HpyV004III (93% identity) | CCATC | M1.HpyAL05ORFHP |
| ??? | M | M2.Hpyfe88ORF155P (99% identity) | CCATC | M2.HpyAL05ORFHP |
| ??? | R | HpyPE19ORF7205P (99% identity) | HpyAL05ORFYP | |
| ??? | M | M.Hpyfe61ORF300P (98% identity) | M.HpyAL05ORFYP | |
| ??? | S | S.HpyAs002XIII (90% identity) | S.HpyAL05ORFXP | |
| ??? | M | M.HpyMA06ORF6885P (99% identity) | M.HpyAL05ORFOP | |
| ??? | R | Hpy1136ORFD1P (100% identity) | HpyAL05ORFOP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyJA112ORF6580P (97% identity) | M.HpyAL05ORFTP | |
| ??? | R | HpyCA20ORF6420P (33% identity) | HpyAL05ORFTP | |
| ??? | M | M.HpyPE115ORF7055P (90% identity) | M.HpyAL05ORFEP | |
| ??? | R | HpyCA1ORF7335P (97% identity) | HpyAL05ORFEP | |