Helicobacter pylori BT302 |
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Putative Helicobacter pylori BT302 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,619,269 bp
GenBank #: CP058285
REBASE acronym: HpyBT302
Org_num: 54089
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyC124ORF2175P (98% identity) | GCANNNNNNTTA | S.HpyBT302ORFCP |
| ??? | M | M.HpyPR04IV (96% identity) | GCANNNNNNTTA | M.HpyBT302ORFCP |
| ??? | R | HpyPO104ORF2550P (92% identity) | GCANNNNNNTTA | HpyBT302ORFCP |
| ??? | S | S.HpyI029XVII (96% identity) | CTANNNNNNNCTT | S.HpyBT302ORFKP |
| ??? | R | HpyNP10ORF2920P (95% identity) | CTANNNNNNRTG | HpyBT302ORFDP |
| ??? | S | S.HpySP502ORF3860P (81% identity) | CTANNNNNNRTG | S.HpyBT302ORFDP |
| ??? | M | M.HpyNAB47ORFK1P (86% identity) | CTANNNNNNRTG | M.HpyBT302ORFDP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyT003VII (97% identity) | CCTC | M1.HpyBT302ORFOP |
| ??? | M | M2.HpySW25IXP (98% identity) | M2.HpyBT302ORFOP | |
| ??? | R | HpyCA25VIIP (94% identity) | GATC | HpyBT302ORFWP |
| ??? | M | M.HpyJ001IX (97% identity) | GATC | M.HpyBT302ORFWP |
| ??? | M | M.HpyKH28ORFWP (96% identity) | TCGA | M.HpyBT302ORFMP |
| ??? | R | HpyI012IIP (92% identity) | CCGG | HpyBT302ORFYP |
| ??? | M | M.HpyCO5ORF1300P (98% identity) | CCGG | M.HpyBT302ORFYP |
| ??? | R | Hpy478AORFFP (97% identity) | CTNAG | HpyBT302ORFNP |
| ??? | M | M.HpySP20IX (98% identity) | CTNAG | M.HpyBT302ORFNP |
| ??? | M | M.Hpyfe21ORF2955P (97% identity) | ATTAAT | M.HpyBT302ORFIP |
| ??? | M | M.HpyNCI39XI (98% identity) | ACNGT | M.HpyBT302ORFUP |
| ??? | R | HpyBR15IIP (97% identity) | ACNGT | HpyBT302ORFUP |
| ??? | M | M.HpyG8GORFVP (97% identity) | GTAC | M.HpyBT302ORFQP |
| ??? | R | Hpy476CORFSP (96% identity) | GTAC | HpyBT302ORFQP |
| ??? | RM | HpyGE3ORF3350P (87% identity) | HpyBT302ORFA1P | |
| ??? | M | M.HpyC80XII (98% identity) | CCNNGG | M.HpyBT302ORFLP |
| ??? | R | HpyPOR115IVP (99% identity) | CCNNGG | HpyBT302ORFLP |
| ??? | R | HpySP507IVP (98% identity) | CGWCG | HpyBT302ORFXP |
| ??? | M | M.HpyU432VI (99% identity) | CGWCG | M.HpyBT302ORFXP |
| ??? | R | HpyCOL206IXP (95% identity) | GTNNAC | HpyBT302ORFPP |
| ??? | M | M.HpyP007VI (92% identity) | GTNNAC | M.HpyBT302ORFPP |
| ??? | M | M.HpyMM08XII (99% identity) | TCNNGA | M.HpyBT302ORFSP |
| ??? | R | HpyMM06XP (99% identity) | TCNNGA | HpyBT302ORFSP |
| ??? | M | M.HpyOki112ORF5935P (97% identity) | GCGC | M.HpyBT302ORFTP |
| ??? | M | M.HpyBS06ORF1610P (96% identity) | CATG | M.HpyBT302ORFRP |
| ??? | R | HpyGT7IP (93% identity) | CATG | HpyBT302ORFRP |
| ??? | R | R2.Hpyfe62ORF6835P (99% identity) | HpyBT302ORFB1P | |
| ??? | M | M.HpyKH21ORFA1P (100% identity) | M.HpyBT302ORFB1P | |
| ??? | RM | HpyGE15ORF6920P (63% identity) | HpyBT302ORFGP | |
| ??? | RM | HpyIS11XXI (86% identity) | HpyBT302ORFBP | |
| ??? | R | HpySWT06XP (97% identity) | CCATC | HpyBT302ORFJP |
| ??? | M | M2.HpyFD662ORF310P (99% identity) | CCATC | M1.HpyBT302ORFJP |
| ??? | M | M1.HpyF020V (98% identity) | CCATC | M2.HpyBT302ORFJP |
| ??? | RM | HpyNY40ORF446P (97% identity) | CYANNNNNNNTGC | HpyBT302ORFHP |
| ??? | S | S1.HpySW31ORF7005P (96% identity) | S1.HpyBT302ORFHP | |
| ??? | S | S.Hpy135ORF7445P (81% identity) | S2.HpyBT302ORFHP | |
| ??? | M | M.HpyKH8ORFHP (98% identity) | TGCA | M.HpyBT302ORFVP |
| ??? | R | HpyUBN18ORFZP (99% identity) | TGCA | HpyBT302ORFVP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyPU001ORF6690P (94% identity) | M.HpyBT302ORFFP | |
| ??? | R | HpyNCI2aORFA1P (94% identity) | HpyBT302ORFFP | |
| ??? | M | M.HpyKH45ORFKP (12% identity) | M.HpyBT302ORFZBP | |
| ??? | M | M.HpySS1DORF1326P (84% identity) | M.HpyBT302ORFZAP | |
| ??? | R | HpyGRE022XIP (90% identity) | HpyBT302ORFZP | |
| ??? | M | M.HpyI028ORF7235P (95% identity) | M.HpyBT302ORFEP | |
| ??? | R | HpyU405ORF7450P (93% identity) | HpyBT302ORFEP | |