Helicobacter pylori CO1768 |
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Putative Helicobacter pylori CO1768 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,622,089 bp
GenBank #: CP058282
REBASE acronym: Hpy1768
Org_num: 54092
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyK036XII (98% identity) | CGANNNNNNTAA | S.Hpy1768ORFYP |
| ??? | M | M.HpyAs009V (98% identity) | CGANNNNNNTAA | M.Hpy1768ORFYP |
| ??? | R | Hpybs3ORFOP (92% identity) | CGANNNNNNTAA | Hpy1768ORFYP |
| ??? | R | Hpy1766ORFAP (79% identity) | Hpy1768ORFZP | |
| ??? | S | S.HpyME06ORF7385P (62% identity) | S.Hpy1768ORFQP | |
| ??? | R | Hpy18ORF6920P (38% identity) | CRTANNNNNNNTC | Hpy1768ORFHBP |
| ??? | R | HpySH007ORF7295P (58% identity) | CRTANNNNNNNTC | Hpy1768ORFHAP |
| ??? | M | M.HpyAs009ORF7400P (74% identity) | CRTANNNNNNNTC | M.Hpy1768ORFHAP |
| ??? | M | M.HpyT029ORF7205P (24% identity) | CRTANNNNNNNTC | M.Hpy1768ORFHBP |
| ??? | S | S.Hpyfe29ORF7520P (98% identity) | CRTANNNNNNNTC | S.Hpy1768ORFHP |
| ??? | S | S.HpyID10ORF6750P (86% identity) | S.Hpy1768ORFPP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyC024X (99% identity) | CCTC | M1.Hpy1768ORFMP |
| ??? | M | M1.Hpyfe127ORF6960P (98% identity) | CCTC | M2.Hpy1768ORFMP |
| ??? | R | Hpy1681ORFGP (96% identity) | CCTC | Hpy1768ORFMP |
| ??? | R | HpyAs010VIP (96% identity) | GATC | Hpy1768ORFXP |
| ??? | M | M.HpyF232ORFMP (98% identity) | GATC | M.Hpy1768ORFXP |
| ??? | M | M.HpyK029II (98% identity) | ATTAAT | M.Hpy1768ORFIP |
| ??? | M | M.Hpy120ORF2335P (97% identity) | ACGT | M.Hpy1768ORFTP |
| ??? | R | HpyU205ORF4060P (99% identity) | ACGT | Hpy1768ORFTP |
| ??? | R | Hpyfe65ORF3785P (99% identity) | CCNNGG | Hpy1768ORFNP |
| ??? | M | M.HpyTW24IV (99% identity) | CCNNGG | M.Hpy1768ORFNP |
| ??? | RM | HpyOki128ORF3185P (89% identity) | Hpy1768ORFBP | |
| ??? | R | HpyCOL5ORF4015P (99% identity) | Hpy1768ORFKP | |
| ??? | M | M.HpyCOL5ORF4015P (99% identity) | M.Hpy1768ORFKP | |
| ??? | R | Hpyfe73ORF2730P (91% identity) | Hpy1768ORFOP | |
| ??? | M | M.Hpy1766ORFIP (98% identity) | M.Hpy1768ORFOP | |
| ??? | M | M.Hpyfe93ORF2050P (99% identity) | TCNNGA | M.Hpy1768ORFUP |
| ??? | R | HpyOK318ORFEP (98% identity) | TCNNGA | Hpy1768ORFUP |
| ??? | M | M.HpyPU001ORF5425P (98% identity) | GCGC | M.Hpy1768ORFVP |
| ??? | M | M.HpyC82I (96% identity) | CATG | M.Hpy1768ORFSP |
| ??? | R | HpyAs004VIIP (95% identity) | GANTC | Hpy1768ORFRP |
| ??? | M | M.HpyJ029X (99% identity) | GANTC | M.Hpy1768ORFRP |
| ??? | R | Hpy1681ORFFP (98% identity) | GAAGA | Hpy1768ORFLP |
| ??? | M | M1.Hpy1681ORFFP (98% identity) | GAAGA | M1.Hpy1768ORFLP |
| ??? | M | M2.Hpyfe78ORF7125P (95% identity) | GAAGA | M2.Hpy1768ORFLP |
| ??? | R | Hpyfe7ORF7395P (98% identity) | TGCA | Hpy1768ORFWP |
| ??? | M | M.HpySH014XII (99% identity) | TGCA | M.Hpy1768ORFWP |
| ??? | RM | HpySG24ORF7095P (90% identity) | Hpy1768ORFCP | |
| ??? | R | HpyPU007IVP (97% identity) | CCATC | Hpy1768ORFJP |
| ??? | M | M1.Hpyfe93ORF140P (99% identity) | CCATC | M1.Hpy1768ORFJP |
| ??? | M | M1.HpySP706IV (100% identity) | CCATC | M2.Hpy1768ORFJP |
| ??? | RM | Hpy464ORF7080P (95% identity) | CYANNNNNNTTC | Hpy1768ORFGP |
| ??? | S | S1.HpyMKM6ORF1372P (61% identity) | S.Hpy1768ORFGP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyCA1ORF4360P (97% identity) | M.Hpy1768ORFEP | |
| ??? | R | HpyPU007ORF6545P (97% identity) | Hpy1768ORFEP | |
| ??? | M | M.HpySH014ORF6660P (97% identity) | M.Hpy1768ORFFP | |
| ??? | R | HpyAs010ORF6855P (79% identity) | Hpy1768ORFFP | |
| ??? | M | M.HpyMA08ORF7060P (90% identity) | M.Hpy1768ORFDP | |
| ??? | R | HpySH010ORF7530P (97% identity) | Hpy1768ORFDP | |