Helicobacter pylori Hk711 |
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Putative Helicobacter pylori Hk711 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,687,334 bp
GenBank #: CP058281
REBASE acronym: HpyHK711
Org_num: 54095
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyCHN1ORF4575P (55% identity) | S.HpyHK711ORFF1P | |
| ??? | M | M.HpyHK721ORFB1P (98% identity) | M.HpyHK711ORFF1P | |
| ??? | R | HpyHK721ORFB1BP (79% identity) | HpyHK711ORFF1P | |
| ??? | S | S.HpyHK711ORFBP (97% identity) | GAGHNNNNNTGT | S.HpyHK711ORFLP |
| ??? | R | Hpy04ORFAP (96% identity) | HpyHK711ORFBP | |
| ??? | S | S.HpyHK711ORFLP (97% identity) | S.HpyHK711ORFBP | |
| ??? | M | M.HpyHK721ORFCP (96% identity) | M.HpyHK711ORFBP | |
| ??? | S | S.HpyOK313ORFJP (97% identity) | CCANNNNNNNTC | S.HpyHK711ORFGP |
| ??? | M | M.HpyAL05ORFCP (96% identity) | CCANNNNNNNTC | M.HpyHK711ORFGP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyHK721ORFNP (98% identity) | CCTC | M1.HpyHK711ORFOP |
| ??? | M | M2.HpyHK721ORFNP (100% identity) | CCTC | M2.HpyHK711ORFOP |
| ??? | R | HpyHK721ORFNP (99% identity) | CCTC | HpyHK711ORFOP |
| ??? | R | HpyHK840ORFHP (100% identity) | CCTTC | HpyHK711ORFFP |
| ??? | M | M.HpyHK840ORFHP (99% identity) | CCTTC | M.HpyHK711ORFFP |
| ??? | M | M.HpyOki112ORF745P (97% identity) | GATC | M.HpyHK711ORFD1P |
| ??? | M | M.HpyAL05ORFIP (99% identity) | TCGA | M.HpyHK711ORFNP |
| ??? | R | HpyHK840ORFAP (99% identity) | CCGG | HpyHK711ORFE1P |
| ??? | M | M.HpyK014V (99% identity) | CCGG | M.HpyHK711ORFE1P |
| ??? | R | HpyHK721ORFOP (100% identity) | CTNAG | HpyHK711ORFPP |
| ??? | M | M.HpyHK721ORFOP (100% identity) | CTNAG | M.HpyHK711ORFPP |
| ??? | M | M.Hpyoh1ORF4535P (100% identity) | GCNGC | M.HpyHK711ORFYP |
| ??? | M | M.HpyHK721ORFJP (99% identity) | ATTAAT | M.HpyHK711ORFIP |
| ??? | M | M.HpyHK840ORFA1P (99% identity) | ACNGT | M.HpyHK711ORFZP |
| ??? | R | HpyKG4IIP (100% identity) | ACNGT | HpyHK711ORFZP |
| ??? | M | M.HpyHK721ORFSP (99% identity) | M.HpyHK711ORFTP | |
| ??? | R | HpyUM065ORF7975P (99% identity) | ACGT | HpyHK711ORFTP |
| ??? | R | HpyHK840ORFOP (100% identity) | CCNNGG | HpyHK711ORFMP |
| ??? | M | M.HpyL024VIII (99% identity) | CCNNGG | M.HpyHK711ORFMP |
| ??? | RM | HpySH010ORF3570P (83% identity) | HpyHK711ORFG1P | |
| ??? | M | M.HpyAL04ORFVP (98% identity) | GATATC | M.HpyHK711ORFB1P |
| ??? | R | Hpyfe62ORF6915P (98% identity) | GATATC | HpyHK711ORFB1P |
| ??? | M | M.HpyHK721ORFRP (100% identity) | GTAC | M.HpyHK711ORFSP |
| ??? | R | HpyM5CORFYP (98% identity) | GTAC | HpyHK711ORFSP |
| ??? | R | Hpyfe93ORF2830P (93% identity) | GTNNAC | HpyHK711ORFQP |
| ??? | M | M.HpyAL05ORFJP (98% identity) | GTNNAC | M.HpyHK711ORFQP |
| ??? | M | M.HpyHK721ORFUP (100% identity) | TCNNGA | M.HpyHK711ORFVP |
| ??? | R | HpyK114XIVP (99% identity) | TCNNGA | HpyHK711ORFVP |
| ??? | M | M.HpyHK721ORFWP (98% identity) | GCGC | M.HpyHK711ORFXP |
| ??? | M | M.HpyUM038ORF6365P (99% identity) | CATG | M.HpyHK711ORFUP |
| ??? | R | HpyHK840ORFUP (97% identity) | CATG | HpyHK711ORFUP |
| ??? | R | HpyHK721ORFQP (97% identity) | GANTC | HpyHK711ORFRP |
| ??? | M | M.HpyJ019VI (99% identity) | GANTC | M.HpyHK711ORFRP |
| ??? | R | HpyNCI2aIIP (97% identity) | GAAGA | HpyHK711ORFKP |
| ??? | M | M2.HpyK045VI (98% identity) | GAAGA | M1.HpyHK711ORFKP |
| ??? | M | M2.HpyUBN18ORFOP (99% identity) | GAAGA | M2.HpyHK711ORFKP |
| ??? | M | M.HpyV001VI (100% identity) | GAATTC | M.HpyHK711ORFWP |
| ??? | R | HpyHK840ORFXP (98% identity) | GAATTC | HpyHK711ORFWP |
| ??? | S | S.HpyPO01ORF6820P (86% identity) | S.HpyHK711ORFHP | |
| ??? | RM | HpyHK721ORFIP (99% identity) | CYANNNNNNTTC | HpyHK711ORFHP |
| ??? | M | M1.HpyAL04ORFLP (99% identity) | CCATC | M1.HpyHK711ORFJP |
| ??? | M | M2.HpyHK840ORFJP (99% identity) | CCATC | M2.HpyHK711ORFJP |
| ??? | R | HpyHK840ORFJP (98% identity) | CCATC | HpyHK711ORFJP |
| ??? | M | M.HpyHK721ORFYP (98% identity) | TGCA | M.HpyHK711ORFA1P |
| ??? | R | HpyHK721ORFYP (100% identity) | TGCA | HpyHK711ORFA1P |
| ??? | M | M.HpyHK721ORFZP (100% identity) | M.HpyHK711ORFC1P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyHK721ORFFP (96% identity) | HpyHK711ORFDP | |
| ??? | M | M.HpyHK711ORFH1AP (96% identity) | M.HpyHK711ORFDP | |
| ??? | M | M.HpyCA15ORF4595P (42% identity) | M.HpyHK711ORFH1BP | |
| ??? | M | M.HpyHK711ORFDP (96% identity) | M.HpyHK711ORFH1AP | |
| ??? | M | M.Hpyfe103ORF630P (97% identity) | M.HpyHK711ORFEP | |
| ??? | R | HpyHK721ORFHP (96% identity) | HpyHK711ORFEP | |
| ??? | R | HpyK114ORF7140P (96% identity) | HpyHK711ORFCP | |
| ??? | M | M.HpyML3ORFDP (96% identity) | M.HpyHK711ORFCP | |