Helicobacter pylori Hk840 |
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Putative Helicobacter pylori Hk840 RM systems
Ref: Suzuki,R. et al. unpublished
REBASE ref # 33451
Complete sequence: 1,622,038 bp
GenBank #: CP058279
REBASE acronym: HpyHK840
Org_num: 54097
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyK051II (98% identity) | CCANNNNNNTC | S.HpyHK840ORFD1P |
| ??? | M | M.HpyK024ORF2270P (97% identity) | CCANNNNNNTC | M.HpyHK840ORFD1P |
| ??? | R | HpyFD568ORFIP (72% identity) | CCANNNNNNTC | HpyHK840ORFD1P |
| ??? | M | M.HpyHK711ORFBP (95% identity) | AAGNNNNNNNTGC | M.HpyHK840ORFE1P |
| ??? | S | S.HpyGRE043XIV (97% identity) | AAGNNNNNNNTGC | S.HpyHK840ORFE1P |
| ??? | R | HpyCA7ORF5505P (95% identity) | AAGNNNNNNNTGC | HpyHK840ORFE1P |
| ??? | S | S.HpyAL03ORFGP (97% identity) | CTANNNNNNNTGC | S.HpyHK840ORFLP |
| ??? | S | S.HpyV004ORF7200P (32% identity) | S2.HpyHK840ORFF1P | |
| ??? | S | S.Hpybs3ORFKP (67% identity) | S1.HpyHK840ORFF1P | |
| ??? | M | M.HpyHK711ORFGP (93% identity) | M.HpyHK840ORFF1P | |
| ??? | R | HpyK112ORF7245P (96% identity) | HpyHK840ORFF1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyMKM5ORF58P (98% identity) | CCTC | M1.HpyHK840ORFNP |
| ??? | M | M2.HpyCA7IVP (99% identity) | CCTC | M2.HpyHK840ORFNP |
| ??? | R | HpyAs006IVP (95% identity) | CCTC | HpyHK840ORFNP |
| ??? | R | HpyHK711ORFFP (100% identity) | CCTTC | HpyHK840ORFHP |
| ??? | M | M.HpyHK711ORFFP (99% identity) | CCTTC | M.HpyHK840ORFHP |
| ??? | R | HpyID5VIP (94% identity) | GATC | HpyHK840ORFB1P |
| ??? | M | M.HpyHK721ORFA1P (99% identity) | GATC | M.HpyHK840ORFB1P |
| ??? | M | M1.HpyTW01ORF900P (99% identity) | M1.HpyHK840ORFG1P | |
| ??? | M | M2.HpyK116ORF1185P (100% identity) | M2.HpyHK840ORFG1P | |
| ??? | R | R1.HpyC61ORFGP (96% identity) | R1.HpyHK840ORFG1P | |
| ??? | R | R2.Hpy1888AORF2090P (94% identity) | R2.HpyHK840ORFG1P | |
| ??? | M | M.Hpy464ORF1300P (97% identity) | TCGA | M.HpyHK840ORFPP |
| ??? | R | HpyOK68ORFMP (97% identity) | CTNAG | HpyHK840ORFQP |
| ??? | M | M.Hpyfe124ORF5400P (99% identity) | CTNAG | M.HpyHK840ORFQP |
| ??? | M | M.Hpyoh1ORF4535P (100% identity) | GCNGC | M.HpyHK840ORFZP |
| ??? | M | M.HpyHK721ORFJP (97% identity) | ATTAAT | M.HpyHK840ORFIP |
| ??? | M | M.HpyHK711ORFZP (99% identity) | ACNGT | M.HpyHK840ORFA1P |
| ??? | R | Hpyfe39ORF4885P (99% identity) | ACNGT | HpyHK840ORFA1P |
| ??? | M | M.Hpyfe2ORF4945P (92% identity) | M.HpyHK840ORFVP | |
| ??? | R | Hpyfe101ORF4780P (99% identity) | ACGT | HpyHK840ORFVP |
| ??? | RM | HpyJ016ORF3390P (89% identity) | HpyHK840ORFBP | |
| ??? | M | M.HpyHK711ORFMP (99% identity) | CCNNGG | M.HpyHK840ORFOP |
| ??? | R | HpyHK711ORFMP (100% identity) | CCNNGG | HpyHK840ORFOP |
| ??? | R | HpyK007IXP (96% identity) | GTAC | HpyHK840ORFTP |
| ??? | M | M.HpyOK314ORFVP (99% identity) | GTAC | M.HpyHK840ORFTP |
| ??? | R | HpyHK721ORFPP (97% identity) | GTNNAC | HpyHK840ORFRP |
| ??? | M | M.HpyJ028VIII (93% identity) | GTNNAC | M.HpyHK840ORFRP |
| ??? | M | M.HpyLI08IX (99% identity) | TCNNGA | M.HpyHK840ORFWP |
| ??? | R | HpyK114XIVP (100% identity) | TCNNGA | HpyHK840ORFWP |
| ??? | M | M.HpyHK711ORFXP (97% identity) | M.HpyHK840ORFYP | |
| ??? | M | M.HpyHK721ORFTP (99% identity) | CATG | M.HpyHK840ORFUP |
| ??? | R | HpyHK711ORFUP (97% identity) | CATG | HpyHK840ORFUP |
| ??? | R | HpyHK721ORFQP (97% identity) | GANTC | HpyHK840ORFSP |
| ??? | M | M.HpyHK721ORFQP (100% identity) | GANTC | M.HpyHK840ORFSP |
| ??? | RM | Hpyfe114ORF6895P (90% identity) | HpyHK840ORFEP | |
| ??? | R | HpyHK721ORFLP (99% identity) | GAAGA | HpyHK840ORFMP |
| ??? | M | M1.HpyHK721ORFLP (100% identity) | GAAGA | M1.HpyHK840ORFMP |
| ??? | M | M2.Hpyfe78ORF7125P (95% identity) | GAAGA | M2.HpyHK840ORFMP |
| ??? | M | M.HpyV001VI (100% identity) | GAATTC | M.HpyHK840ORFXP |
| ??? | R | HpyHK721ORFVP (100% identity) | GAATTC | HpyHK840ORFXP |
| ??? | C | C.HpyH014IXP (98% identity) | C.HpyHK840ORFKP | |
| ??? | M | M1.HpyK036XIII (99% identity) | GGATG | M1.HpyHK840ORFKP |
| ??? | M | M1.Hpy3192ORF295P (99% identity) | GGATG | M2.HpyHK840ORFKP |
| ??? | R | HpyK037IXP (97% identity) | GGATG | HpyHK840ORFKP |
| ??? | M | M1.HpyU123V (99% identity) | CCATC | M1.HpyHK840ORFJP |
| ??? | M | M2.HpyHK721ORFKP (100% identity) | CCATC | M2.HpyHK840ORFJP |
| ??? | R | HpyHK711ORFJP (98% identity) | CCATC | HpyHK840ORFJP |
| ??? | RM | Hpyfe101ORF60P (91% identity) | HpyHK840ORFDP | |
| ??? | M | M.HpyKA2IX (59% identity) | M.HpyHK840ORFCP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyF226ORFKP (97% identity) | M.HpyHK840ORFGP | |
| ??? | R | HpyHK711ORFDP (93% identity) | HpyHK840ORFGP | |
| ??? | M | M.HpyUM065ORF3390P (96% identity) | M.HpyHK840ORFC1P | |
| ??? | R | HpyHK721ORFHP (96% identity) | HpyHK840ORFC1P | |
| ??? | R | HpyK007ORF7115P (96% identity) | HpyHK840ORFFP | |
| ??? | M | M.HpyK034ORF7040P (96% identity) | M.HpyHK840ORFFP | |