Helicobacter pylori AL02 |
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Putative Helicobacter pylori AL02 RM systems
Ref: Saitou,N. et al. unpublished
REBASE ref # 33450
Complete sequence: 1,575,789 bp
GenBank #: CP058250
REBASE acronym: HpyAL02
Org_num: 54085
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyC014ORF2400P (98% identity) | CACNNNNNTG | S.HpyAL02ORFDP |
| ??? | M | M.HpyCA1ORF4770P (97% identity) | CACNNNNNTG | M.HpyAL02ORFDP |
| ??? | R | HpyCA15ORF3340P (94% identity) | CACNNNNNTG | HpyAL02ORFDP |
| ??? | R | HpyAL04ORFEP (98% identity) | TCTANNNNNNRTAA | HpyAL02ORFFP |
| ??? | M | M.HpyAL05ORFCP (99% identity) | TCTANNNNNNRTAA | M.HpyAL02ORFFP |
| ??? | S | S.HpyTW08XIII (97% identity) | TCTANNNNNNRTAA | S.HpyAL02ORFFP |
| ??? | S | S.HpySP315XIV (95% identity) | GRTANNNNNNRTAA | S.HpyAL02ORFLP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpyfe13ORF6650P (96% identity) | GATC | HpyAL02ORFTP |
| ??? | M | M.HpyP89ORFEP (98% identity) | GATC | M.HpyAL02ORFTP |
| ??? | M | M.HpyAL04ORFNP (100% identity) | TCGA | M.HpyAL02ORFKP |
| ??? | R | HpyIS10VP (66% identity) | CCGG | HpyAL02ORFUP |
| ??? | M | M.HpyCA8IV (100% identity) | CCGG | M.HpyAL02ORFUP |
| ??? | M | M.HpySP804ORF1705P (100% identity) | GCNGC | M.HpyAL02ORFRP |
| ??? | M | M.HpyCA1II (98% identity) | ATTAAT | M.HpyAL02ORFJP |
| ??? | M | M.HpyCA1ORF4680P (94% identity) | M.HpyAL02ORFOP | |
| ??? | R | HpyU205ORF4060P (98% identity) | ACGT | HpyAL02ORFOP |
| ??? | M | M.HpyAL04ORFPP (100% identity) | GTAC | M.HpyAL02ORFNP |
| ??? | R | HpyPU007XP (71% identity) | GTAC | HpyAL02ORFNP |
| ??? | RM | HpyCA15ORF4350P (86% identity) | HpyAL02ORFAP | |
| ??? | R | HpyCA14XIP (99% identity) | GTNNAC | HpyAL02ORFMP |
| ??? | M | M.HpyCOL305VII (93% identity) | GTNNAC | M.HpyAL02ORFMP |
| ??? | M | M.HpyAL05ORFNP (99% identity) | GCGC | M.HpyAL02ORFQP |
| ??? | M | M.HpyCA1I (98% identity) | CATG | M.HpyAL02ORFPP |
| ??? | RM | HpyCA1ORF6600P (80% identity) | HpyAL02ORFEP | |
| ??? | R | HpyK034ORF7415P (94% identity) | TGCA | HpyAL02ORFSP |
| ??? | M | M.HpyCA23XII (97% identity) | TGCA | M.HpyAL02ORFSP |
| ??? | RM | HpyF210ORF1469P (77% identity) | HpyAL02ORFCP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyCA7ORF2325P (97% identity) | HpyAL02ORFGP | |
| ??? | M | M.HpyCA26ORF2795P (75% identity) | M.HpyAL02ORFGP | |
| ??? | R | HpyCA23ORF2570P (95% identity) | HpyAL02ORFHP | |
| ??? | M | M.HpyK115ORF200P (97% identity) | M.HpyAL02ORFHP | |
| ??? | M | M.HpyCA18ORF580P (97% identity) | M.HpyAL02ORFVP | |
| ??? | R | HpyLI03ORF6715P (82% identity) | HpyAL02ORFVBP | |
| ??? | R | HpyCA18ORF580P (9% identity) | HpyAL02ORFVAP | |
| ??? | M | M.Hpyfe123ORF40P (95% identity) | GWCAY | M.HpyAL02ORFIP |
| ??? | R | HpyAL05ORFEP (97% identity) | GWCAY | HpyAL02ORFIP |