Dickeya zeae MS1 |
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Putative Dickeya zeae MS1 RM systems
Ref: Zhang,J.X. et al. Genome Announc 1 (3), e00317-13 (2013)
REBASE ref # 16129
Complete sequence: 4,831,702 bp
GenBank #: CP053012
REBASE acronym: DzeMS1
Org_num: 10775
All begin J417_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2105 | AAA family ATPase | |||
| 2110 | R | DzeMS3ORFBP (100% identity) | DzeMS1ORFAP | |
| 2115 | DUF4268 domain-containing protein | |||
| 2120 | S | S.DzeMS3ORFBP (100% identity) | S.DzeMS1ORFAP | |
| 2125 | M | M.DzeMS3ORFBP (100% identity) | M.DzeMS1ORFAP | |
| 2130 | toll/interleukin-1 receptor domain-containing | |||
| 7490 | DUF4263 domain-containing protein | |||
| 7495 | S | S.DzeMS3ORFCP (100% identity) | S.DzeMS1ORFBP | |
| 7500 | M | M.DzeMS3ORFCP (100% identity) | M.DzeMS1ORFBP | |
| 7505 | ATP-binding protein | |||
| 7510 | R | DzeMS3ORFCP (100% identity) | DzeMS1ORFBP | |
| 7520 | DUF1738 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | integrase arm-type DNA-binding domain-containing | |||
| 2095 | R | DzeMS3ORFAP (100% identity) | DzeMS1ORF2095P | |
| 2100 | 203 aa hypothetical protein | |||
| 11085 | 921 aa hypothetical protein | |||
| 11090 | M | M.DzeMS3ORFDP (100% identity) | TGGCCA | M.DzeMS1ORFFP |
| 11095 | IS3 family transposase | |||
| 13670 | 3-5 exoribonuclease | |||
| 13675 | M | M.DzeWH1ORF12910P (100% identity) | GATC | M.DzeMS1ORFDP |
| 13680 | ASCH domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19610 | ribulose-phosphate 3-epimerase | |||
| 19615 | M | M.DzeWH1DamP (100% identity) | GATC | M.DzeMS1ORFCP |
| 19620 | SPOR domain-containing protein | |||