Rhodanobacter denitrificans FW104-R3 |
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Putative Rhodanobacter denitrificans FW104-R3 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
Complete sequence: 3,959,116 bp
GenBank #: CP088921
REBASE acronym: RdeR3
Org_num: 55092
All begin LRK44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5635 | type II toxin-antitoxin system HicB family | |||
| 5640 | M | M.RdeR5ORF5635P (100% identity) | M.RdeR3ORF5640P | |
| 5645 | AAA family ATPase | |||
| 5650 | virulence RhuM family protein | |||
| 5655 | S | S.RdeR5ORF5635P (100% identity) | S.RdeR3ORF5640P | |
| 5660 | R | Rde10F02ORF5635P (100% identity) | RdeR3ORF5640P | |
| 5665 | 161 aa hypothetical protein | |||
| 16140 | glycerophosphodiester phosphodiesterase | |||
| 16145 | R | RdeR5ORF16255P (100% identity) | RdeR3ORF16165P | |
| 16150 | HigA family addiction module antitoxin | |||
| 16155 | type II toxin-antitoxin system RelE/ParE family | |||
| 16160 | S | S.RdeR5ORF16255P (100% identity) | S.RdeR3ORF16165P | |
| 16165 | M | M.RdeR5ORF16255P (100% identity) | M.RdeR3ORF16165P | |
| 16175 | M61 family metallopeptidase | |||
| 17575 | helix-turn-helix transcriptional regulator | |||
| 17580 | M | M.Rsp24678ORF17005P (100% identity) | M.RdeR3ORF17580P | |
| 17585 | S | S.RdeR2ORF856P (100% identity) | S.RdeR3ORF17580P | |
| 17590 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9475 | glycosyltransferase | |||
| 9480 | M | M.RdeR5ORF9560P (100% identity) | M.RdeR3ORF9480P | |
| 9485 | R | RdeR5ORF9560P (100% identity) | CTCGAG | RdeR3ORF9480P |
| 9490 | EamA family transporter | |||
| 10305 | 181 aa hypothetical protein | |||
| 10310 | M | M.RdeR5ORF10390P (100% identity) | M.RdeR3ORF10310P | |
| 10315 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | APC family permease | |||
| 3215 | R | RdeR5ORF3230P (100% identity) | RdeR3ORF3230P | |
| 3220 | type II toxin-antitoxin system RelE/ParE family | |||
| 3225 | HigA family addiction module antitoxin | |||
| 3230 | M | M.Rde10F02ORF3225P (100% identity) | M.RdeR3ORF3230P | |
| 3235 | 148 aa hypothetical protein | |||
| 10600 | cysteine dioxygenase family protein | |||
| 10610 | R | RdeR5ORF10695P (100% identity) | RdeR3ORF10615P | |
| 10615 | M | M.Rde10F02ORF10610P (100% identity) | M.RdeR3ORF10615P | |
| 10620 | Fic family protein | |||