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Putative Rhodanobacter denitrificans DSM-24678 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
Complete sequence: 3,958,367 bp
GenBank #: CP088919
REBASE acronym: Rde24678
Org_num: 55088
All begin LRK24_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3065 | M61 family metallopeptidase | |||
3075 | M | M.Rsp24678ORF13313P (100% identity) | M.Rde24678ORF3075P | |
3080 | S | S.RdeR2ORF3623P (100% identity) | S.Rde24678ORF3075P | |
3085 | type II toxin-antitoxin system RelE/ParE family | |||
3090 | HigA family addiction module antitoxin | |||
3095 | R | Rsp24678ORF13313P (100% identity) | Rde24678ORF3075P | |
3100 | glycerophosphodiester phosphodiesterase | |||
17700 | helix-turn-helix transcriptional regulator | |||
17705 | M | M.Rsp24678ORF17005P (100% identity) | M.Rde24678ORF17705P | |
17710 | S | S.RdeR3ORF17580P (100% identity) | S.Rde24678ORF17705P | |
17715 | toll/interleukin-1 receptor domain-containing | |||
17750 | XRE family transcriptional regulator | |||
17755 | R | Rsp24678ORF17055P (100% identity) | Rde24678ORF17755P | |
17760 | 165 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9230 | AAA family ATPase | |||
9235 | M | M.RdeR5ORF10390P (100% identity) | M.Rde24678ORF9235P | |
9240 | 181 aa hypothetical protein | |||
9995 | EamA family transporter | |||
10000 | R | Rsp24678ORF17320P (100% identity) | CTCGAG | Rde24678ORF10005P |
10005 | M | M.RdeR2ORF2481P (99% identity) | M.Rde24678ORF10005P | |
10010 | glycosyltransferase | |||
11050 | ribbon-helix-helix protein, CopG family | |||
11055 | M | M.Rsp24678ORF3635P (100% identity) | ACCGGT | M.Rde24678ORF11055P |
11060 | 555 aa hypothetical protein | |||
11065 | restriction endonuclease-like protein | |||
11070 | V | V.Rsp24678ORF3635P (100% identity) | V.Rde24678ORF11055P | |
11075 | phage infection protein | |||
14755 | DUF2069 domain-containing protein | |||
14760 | R | Rsp24678ORFAP (87% identity) | R1.Rde24678ORF14770P | |
14765 | IS701 family transposase | |||
??? | R | Rsp24678ORF16835P (100% identity) | GGGCCC | R2.Rde24678ORF14770P |
14770 | M | M.Rsp24678ORF16835P (100% identity) | GGGCCC | M.Rde24678ORF14770P |
14775 | thioesterase family protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
8690 | Fic family protein | |||
8695 | M | M.Rsp24678ORF5071P (100% identity) | M.Rde24678ORF8695P | |
8700 | R | Rsp24678ORF5071P (100% identity) | Rde24678ORF8695P | |
8705 | Tn3 family transposase | |||
13840 | ComF family protein | |||
13845 | M | M.Rsp24678ORF7981P (72% identity) | M.Rde24678ORF13845P | |
13850 | R | Rsp24678ORF7981P (100% identity) | Rde24678ORF13845P | |
13855 | NERD domain-containing protein | |||
16285 | 148 aa hypothetical protein | |||
16290 | M | M.Rsp24678ORF8833P (99% identity) | M.Rde24678ORF16290P | |
16295 | HigA family addiction module antitoxin | |||
16300 | type II toxin-antitoxin system RelE/ParE family | |||
16305 | R | Rsp24678ORF8833P (100% identity) | Rde24678ORF16290P | |
16310 | APC family permease |