Rhodanobacter denitrificans FW107-2APBS1 |
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Putative Rhodanobacter denitrificans FW107-2APBS1 RM systems
Ref: Zhou,A. and Zhou,J. unpublished
REBASE ref # 33737
Complete sequence: 3,984,560 bp
GenBank #: CP088918
REBASE acronym: RdePBS1
Org_num: 55094
All begin LRJ86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5945 | restriction endonuclease | |||
| 5950 | M | M.RdeR2ORF1482P (100% identity) | M.RdePBS1ORF5950P | |
| 5955 | S | S.RdeR2ORF1482P (100% identity) | S.RdePBS1ORF5950P | |
| 5960 | 203 aa hypothetical protein | |||
| 5965 | R | RdeMT042ORF340P (100% identity) | RdePBS1ORF5950P | |
| 5970 | 164 aa hypothetical protein | |||
| 8860 | cysteine dioxygenase family protein | |||
| 8870 | R | RdeR2ORF3363P (100% identity) | RdePBS1ORF8875P | |
| 8875 | M | M.RdeR2ORF3363P (100% identity) | M.RdePBS1ORF8875P | |
| 8880 | S | S.RdeR2ORF3363P (100% identity) | S.RdePBS1ORF8875P | |
| 8885 | AAA family ATPase | |||
| 14905 | glycerophosphodiester phosphodiesterase | |||
| 14910 | R | RdeR2ORF3623P (100% identity) | RdePBS1ORF14930P | |
| 14915 | HigA family addiction module antitoxin | |||
| 14920 | type II toxin-antitoxin system RelE/ParE family | |||
| 14925 | S | S.RdeR2ORF3623P (100% identity) | S.RdePBS1ORF14930P | |
| 14930 | M | M.Rsp24678ORF13313P (100% identity) | M.RdePBS1ORF14930P | |
| 14940 | M61 family metallopeptidase | |||
| 16175 | helix-turn-helix transcriptional regulator | |||
| 16180 | M | M.Rsp24678ORF17005P (100% identity) | M.RdePBS1ORF16180P | |
| 16185 | S | S.RdeR3ORF17580P (100% identity) | S.RdePBS1ORF16180P | |
| 16190 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 155 | macro domain-containing protein | |||
| 160 | R | RdeR2I (100% identity) | GCNGC | RdePBS1ORF160P |
| 165 | 282 aa hypothetical protein | |||
| 175 | ATP-binding protein | |||
| 180 | M | M.RdeR2ORF423P (100% identity) | M.RdePBS1ORF180P | |
| 185 | V | V.RdeR2ORF423P (92% identity) | V.RdePBS1ORF180P | |
| 190 | restriction endonuclease | |||
| 7845 | glycosyltransferase | |||
| 7850 | M | M.RdeR2ORF2481P (100% identity) | CTCGAG | M.RdePBS1ORF7850P |
| ??? | R | RdeR5ORF9560P (100% identity) | CTCGAG | RdePBS1ORF7850P |
| 7860 | EamA family transporter | |||
| 8570 | 181 aa hypothetical protein | |||
| 8575 | M | M.RdeR5ORF10390P (100% identity) | M.RdePBS1ORF8575P | |
| 8580 | AAA family ATPase | |||
| 11155 | phage tail assembly chaperone | |||
| 11160 | M | M.RdeR2ORF1613P (100% identity) | M.RdePBS1ORF11160P | |
| 11165 | 56 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1245 | APC family permease | |||
| 1250 | R | RdeR2ORF242P (100% identity) | RdePBS1ORF1265P | |
| 1255 | type II toxin-antitoxin system RelE/ParE family | |||
| 1260 | HigA family addiction module antitoxin | |||
| 1265 | M | M.RdeR2ORF242P (99% identity) | M.RdePBS1ORF1265P | |
| 1270 | 142 aa hypothetical protein | |||
| 3665 | NERD domain-containing protein | |||
| 3670 | R | RdeR2ORF1038P (100% identity) | RdePBS1ORF3675P | |
| 3675 | M | M.RdeR2ORF1038P (72% identity) | M.RdePBS1ORF3675P | |
| 3680 | ComF family protein | |||